Variant report

Variant rs10423159
Chromosome Location chr19:53211024-53211025
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53194800-53218800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:53202800-53217400 ZNF genes & repeats Liver Liver
3 chr19:53205600-53217400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
4 chr19:53206400-53212200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
5 chr19:53206600-53217800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr19:53206600-53227200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:53206800-53214000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
8 chr19:53207200-53211600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr19:53207200-53211800 ZNF genes & repeats Thymus Thymus
10 chr19:53207200-53212200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr19:53207200-53215400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr19:53207200-53217600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
13 chr19:53207200-53218800 Strong transcription Placenta Placenta
14 chr19:53207400-53212200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr19:53207400-53214600 Weak transcription Stomach Mucosa stomach
16 chr19:53207400-53216400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:53207400-53219400 Strong transcription Dnd41 blood
18 chr19:53207600-53211800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
19 chr19:53207600-53212200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr19:53207600-53216000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr19:53207800-53211800 Strong transcription Skeletal Muscle Female skeletal muscle
22 chr19:53207800-53212200 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr19:53207800-53212400 Strong transcription Skeletal Muscle Male skeletal muscle
24 chr19:53208000-53212000 Strong transcription Brain Angular Gyrus brain
25 chr19:53208000-53212400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
26 chr19:53208000-53212400 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
27 chr19:53208000-53216400 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
28 chr19:53208200-53211600 Strong transcription Rectal Smooth Muscle rectum
29 chr19:53208200-53211800 ZNF genes & repeats Primary hematopoietic stem cells blood
30 chr19:53208200-53211800 Strong transcription Left Ventricle heart
31 chr19:53208200-53219400 Strong transcription Fetal Muscle Trunk muscle
32 chr19:53208400-53212000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:53208400-53212400 ZNF genes & repeats Primary B cells from peripheral blood blood
34 chr19:53208400-53216000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
35 chr19:53208400-53217400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr19:53208400-53218800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
37 chr19:53208600-53213200 Weak transcription Pancreas Pancrea
38 chr19:53208600-53213600 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
39 chr19:53208600-53214000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
40 chr19:53208800-53212000 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
41 chr19:53208800-53212000 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
42 chr19:53208800-53213800 ZNF genes & repeats Primary T cells fromperipheralblood blood
43 chr19:53209000-53213000 Weak transcription Brain Germinal Matrix brain
44 chr19:53209400-53211200 Strong transcription Fetal Intestine Large intestine
45 chr19:53209400-53214600 Weak transcription Fetal Brain Female brain
46 chr19:53209400-53225800 Weak transcription Hela-S3 cervix
47 chr19:53209600-53211400 Strong transcription Adipose Nuclei Adipose
48 chr19:53209600-53211800 Strong transcription Duodenum Mucosa Duodenum
49 chr19:53209600-53213200 Strong transcription Duodenum Smooth Muscle Duodenum
50 chr19:53209600-53218200 Weak transcription iPS-15b Cell Line embryonic stem cell

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