Variant report
| Variant | rs1042477 |
|---|---|
| Chromosome Location | chr15:56121886-56121887 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:56095800-56128600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr15:56106000-56131200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 3 | chr15:56112400-56124600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 4 | chr15:56112600-56122000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr15:56112600-56122000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 6 | chr15:56112600-56122200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 7 | chr15:56112600-56123800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 8 | chr15:56112600-56133600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 9 | chr15:56114600-56128200 | Weak transcription | Esophagus | oesophagus |
| 10 | chr15:56115400-56122400 | Weak transcription | Aorta | Aorta |
| 11 | chr15:56115400-56148000 | Weak transcription | Ovary | ovary |
| 12 | chr15:56115800-56129800 | Weak transcription | Hela-S3 | cervix |
| 13 | chr15:56116400-56122200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 14 | chr15:56116400-56122200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 15 | chr15:56116400-56122400 | Weak transcription | Fetal Intestine Small | intestine |
| 16 | chr15:56116400-56124800 | Weak transcription | Colon Smooth Muscle | Colon |
| 17 | chr15:56116400-56129000 | Weak transcription | NHLF | lung |
| 18 | chr15:56116400-56129600 | Weak transcription | NHDF-Ad | bronchial |
| 19 | chr15:56116400-56133400 | Weak transcription | Fetal Lung | lung |
| 20 | chr15:56116600-56122200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 21 | chr15:56116600-56122200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 22 | chr15:56116600-56122400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 23 | chr15:56116600-56123800 | Weak transcription | Adipose Nuclei | Adipose |
| 24 | chr15:56116600-56150600 | Weak transcription | Right Ventricle | heart |
| 25 | chr15:56116800-56122200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 26 | chr15:56116800-56162200 | Weak transcription | Fetal Heart | heart |
| 27 | chr15:56117200-56122000 | Weak transcription | Fetal Intestine Large | intestine |
| 28 | chr15:56117200-56122400 | Weak transcription | Fetal Stomach | stomach |
| 29 | chr15:56117600-56131200 | Weak transcription | Small Intestine | intestine |
| 30 | chr15:56118000-56125800 | Strong transcription | HSMM | muscle |
| 31 | chr15:56118600-56122400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 32 | chr15:56118600-56151000 | Weak transcription | Fetal Kidney | kidney |
| 33 | chr15:56118800-56122200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 34 | chr15:56118800-56122200 | Weak transcription | Left Ventricle | heart |
| 35 | chr15:56118800-56147000 | Weak transcription | Gastric | stomach |
| 36 | chr15:56118800-56149200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 37 | chr15:56118800-56151400 | Weak transcription | Brain Anterior Caudate | brain |
| 38 | chr15:56119200-56133000 | Weak transcription | Primary T cells from cord blood | blood |
| 39 | chr15:56119400-56122600 | Strong transcription | A549 | lung |
| 40 | chr15:56119400-56123000 | Enhancers | HMEC | breast |
| 41 | chr15:56119400-56124800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 42 | chr15:56119400-56134800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 43 | chr15:56120000-56125600 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 44 | chr15:56120000-56126200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 45 | chr15:56120000-56136800 | Strong transcription | Liver | Liver |
| 46 | chr15:56120000-56144800 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 47 | chr15:56120000-56147800 | Weak transcription | HepG2 | liver |
| 48 | chr15:56120200-56122200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 49 | chr15:56120200-56125600 | Strong transcription | NH-A | brain |
| 50 | chr15:56120200-56125800 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
