Variant report

Variant	rs10425276
Chromosome Location	chr19:43526501-43526502
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr19:43526396-43526619	MCF10A-Er-Src	breast:	n/a	n/a
2	STAT3	chr19:43526427-43526627	MCF10A-Er-Src	breast:	n/a	n/a
3	JUND	chr19:43525676-43526682	SK-N-SH	brain:	n/a	chr19:43526034-43526042
4	FOS	chr19:43525829-43526647	MCF10A-Er-Src	breast:	n/a	chr19:43526034-43526042
5	EP300	chr19:43525870-43526615	Hela-S3	cervix:	n/a	n/a
6	GATA3	chr19:43525679-43526755	SK-N-SH	brain:	n/a	n/a
7	USF1	chr19:43526283-43526716	A549	lung:	n/a	chr19:43526500-43526511
8	STAT3	chr19:43526286-43526501	MCF10A-Er-Src	breast:	n/a	n/a
9	E2F4	chr19:43526380-43526646	MCF10A-Er-Src	breast:	n/a	n/a
10	POLR2A	chr19:43525751-43526797	SK-N-SH	brain:	n/a	n/a
11	MAX	chr19:43526421-43526664	SK-N-SH	brain:	n/a	n/a
12	SP1	chr19:43525774-43526702	A549	lung:	n/a	n/a
13	GATA3	chr19:43525644-43526789	SK-N-SH	brain:	n/a	n/a
14	FOSL2	chr19:43526334-43526619	A549	lung:	n/a	n/a
15	FOS	chr19:43525910-43526647	MCF10A-Er-Src	breast:	n/a	chr19:43526034-43526042
16	ESR1	chr19:43525884-43526755	T-47D	breast:	n/a	n/a
17	TCF12	chr19:43525669-43526689	SK-N-SH	brain:	n/a	n/a
18	STAT3	chr19:43526418-43526619	MCF10A-Er-Src	breast:	n/a	n/a
19	FOSL2	chr19:43526233-43526824	SK-N-SH	brain:	n/a	n/a
20	FOS	chr19:43525801-43526647	MCF10A-Er-Src	breast:	n/a	chr19:43526034-43526042
21	USF1	chr19:43526304-43526707	A549	lung:	n/a	chr19:43526500-43526511
22	CEBPB	chr19:43525800-43526621	IMR90	lung:	n/a	n/a
23	POLR2A	chr19:43526367-43526695	Hela-S3	cervix:	n/a	n/a
24	USF1	chr19:43526196-43526827	A549	lung:	n/a	chr19:43526500-43526511
25	EP300	chr19:43525641-43526756	SK-N-SH	brain:	n/a	n/a
26	FOSL2	chr19:43526355-43526605	HepG2	liver:	n/a	n/a
27	NFIC	chr19:43525636-43526793	SK-N-SH	brain:	n/a	n/a
28	USF1	chr19:43526374-43526562	HepG2	liver:	n/a	chr19:43526500-43526511
29	NR3C1	chr19:43525691-43527564	A549	lung:	n/a	n/a
30	USF1	chr19:43526290-43526639	A549	lung:	n/a	chr19:43526500-43526511
31	MYC	chr19:43526389-43526631	MCF10A-Er-Src	breast:	n/a	n/a
32	POLR2A	chr19:43526293-43526879	U87	brain:	n/a	n/a
33	USF2	chr19:43526324-43526657	Hela-S3	cervix:	n/a	chr19:43526501-43526512
34	USF1	chr19:43526328-43526574	SK-N-SH_RA	brain:	n/a	chr19:43526500-43526511
35	JUND	chr19:43526308-43526708	A549	lung:	n/a	n/a
36	MAFK	chr19:43526293-43526584	IMR90	lung:	n/a	n/a
37	JUN	chr19:43525887-43526630	Hela-S3	cervix:	n/a	chr19:43526034-43526042
38	FOS	chr19:43525872-43526647	MCF10A-Er-Src	breast:	n/a	chr19:43526034-43526042
39	JUND	chr19:43525824-43526651	Hela-S3	cervix:	n/a	chr19:43526034-43526042
40	ESR1	chr19:43525836-43526769	T-47D	breast:	n/a	n/a
41	POLR2A	chr19:43525774-43526727	U87	brain:	n/a	n/a
42	PBX3	chr19:43526309-43526673	SK-N-SH	brain:	n/a	n/a
43	RCOR1	chr19:43525481-43526594	IMR90	lung:	n/a	n/a
44	USF1	chr19:43526373-43526640	A549	lung:	n/a	chr19:43526500-43526511
45	POLR2A	chr19:43526382-43526651	SK-N-SH	brain:	n/a	n/a
46	CEBPB	chr19:43525813-43526656	Hela-S3	cervix:	n/a	n/a
47	USF1	chr19:43525943-43526786	A549	lung:	n/a	chr19:43526500-43526511
48	SP1	chr19:43525739-43526685	A549	lung:	n/a	n/a
49	REST	chr19:43526376-43526591	SK-N-SH	brain:	n/a	n/a
50	USF1	chr19:43526347-43526663	SK-N-SH_RA	brain:	n/a	chr19:43526500-43526511

Variant related genes	Relation type
PSG11	TF binding region

Extended variants
information (count: 659 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10401564	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10401790	0.83[AMR][1000 genomes]
rs10402756	0.85[AMR][1000 genomes]
rs10403382	0.83[AMR][1000 genomes]
rs10403699	0.83[AMR][1000 genomes]
rs10404172	1.00[AMR][1000 genomes]
rs10404891	0.83[AMR][1000 genomes]
rs10406902	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs10407795	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10407853	0.83[AMR][1000 genomes]
rs10408188	0.83[AMR][1000 genomes]
rs10408959	0.83[AMR][1000 genomes]
rs10409165	0.83[AMR][1000 genomes]
rs10410410	0.83[AMR][1000 genomes]
rs10412276	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10412348	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10413845	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs10414492	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10415068	0.83[AMR][1000 genomes]
rs10415877	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10418385	0.83[AMR][1000 genomes]
rs10419056	0.83[AMR][1000 genomes]
rs10419290	0.83[AMR][1000 genomes]
rs10421405	0.83[AMR][1000 genomes]
rs10424712	0.83[AMR][1000 genomes]
rs10425485	0.83[AMR][1000 genomes]
rs10426402	0.83[AMR][1000 genomes]
rs10426763	0.83[AMR][1000 genomes]
rs10426814	0.83[AMR][1000 genomes]
rs13344656	0.86[AFR][1000 genomes]
rs28391785	0.83[AMR][1000 genomes]
rs28414000	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs28425669	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28447290	0.83[AMR][1000 genomes]
rs28461672	0.80[AFR][1000 genomes]
rs28519535	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs28525529	0.85[AMR][1000 genomes]
rs28633828	0.83[AMR][1000 genomes]
rs28645260	0.83[AMR][1000 genomes]
rs28704748	0.83[AMR][1000 genomes]
rs4029161	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73553515	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:617 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422471	chr19:42733141-43669485	Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
2	esv2422468	chr19:42991289-43669027	Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
3	esv2758501	chr19:43042747-43899053	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
4	esv2758763	chr19:43042747-43899053	Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
5	nsv428023	chr19:43042747-43899053	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
6	esv2422227	chr19:43059426-43669485	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
7	nsv1056270	chr19:43139043-43542819	Enhancers Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
8	nsv544007	chr19:43141984-43529861	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	nsv1061798	chr19:43141984-43741311	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
10	nsv544008	chr19:43141984-43741311	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
11	esv2754239	chr19:43145417-43559330	Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
12	esv2757697	chr19:43164418-43870887	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
13	nsv1055872	chr19:43173614-44075193	Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
14	nsv544009	chr19:43173614-44075193	Enhancers ZNF genes & repeats Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
15	nsv544010	chr19:43173814-43584478	Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
16	nsv544011	chr19:43173814-43741311	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
17	esv2751786	chr19:43198035-43685930	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
18	nsv516973	chr19:43202770-43866823	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
19	nsv869916	chr19:43203105-43584433	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
20	nsv869571	chr19:43203105-43802656	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
21	nsv869565	chr19:43203105-43810421	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
22	nsv963056	chr19:43203249-43798708	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
23	nsv9730	chr19:43203459-43802656	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
24	esv1812820	chr19:43203937-43803388	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
25	esv1808074	chr19:43214215-43805847	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
26	esv1813803	chr19:43214415-43805651	Active TSS ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
27	esv2763121	chr19:43215328-43846394	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
28	esv1846846	chr19:43225921-43774853	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
29	esv1805299	chr19:43227458-43790318	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
30	nsv911810	chr19:43233048-43629573	Enhancers Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
31	esv2760524	chr19:43237611-43805328	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
32	esv34661	chr19:43240379-43673190	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
33	esv2751787	chr19:43240379-43685930	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
34	esv2751788	chr19:43240379-43711592	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
35	nsv432049	chr19:43240379-43711592	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
36	esv2751789	chr19:43240379-43731159	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
37	nsv432050	chr19:43240379-43777571	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
38	esv2751790	chr19:43240379-43805328	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
39	nsv529148	chr19:43242595-43530001	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
40	nsv1067715	chr19:43242795-43741310	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
41	nsv529386	chr19:43242795-43741310	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
42	nsv916162	chr19:43242811-43529887	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
43	nsv916623	chr19:43242811-43584499	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
44	nsv497975	chr19:43242811-43741714	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
45	nsv911811	chr19:43247348-43806559	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
46	nsv1066158	chr19:43255205-43542819	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
47	nsv911813	chr19:43257015-43621157	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
48	nsv544012	chr19:43260648-43584632	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
49	nsv544013	chr19:43260648-43741450	Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
50	nsv544014	chr19:43260649-43584633	Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:43524800-43527200	Enhancers	NHDF-Ad	bronchial
2	chr19:43525000-43528400	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr19:43525000-43528600	Enhancers	HMEC	breast
4	chr19:43525200-43528000	Enhancers	NHLF	lung
5	chr19:43525200-43528400	Enhancers	NHEK	skin
6	chr19:43525400-43526800	Enhancers	Muscle Satellite Cultured Cells	--
7	chr19:43525400-43527000	Enhancers	HSMMtube	muscle
8	chr19:43525400-43527200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr19:43525400-43527800	Enhancers	HSMM	muscle
10	chr19:43525600-43526600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr19:43525600-43528400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr19:43525800-43526600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr19:43525800-43526800	Enhancers	A549	lung
14	chr19:43526000-43526800	Enhancers	Hela-S3	cervix
15	chr19:43526000-43527400	Weak transcription	Placenta	Placenta
16	chr19:43526200-43526600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr19:43526200-43527800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr19:43526400-43527600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr19:43526400-43527600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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