The 2.0 version of rSNPBase

Variant report

Variant rs10425969
Chromosome Location chr19:21252651-21252652
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21204400-21264800 Weak transcription Right Ventricle heart
2 chr19:21236400-21264800 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr19:21240000-21264800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr19:21240000-21264800 Weak transcription Brain Inferior Temporal Lobe brain
5 chr19:21240200-21264800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr19:21240800-21256800 Weak transcription Placenta Amnion Placenta Amnion
7 chr19:21241000-21264800 Weak transcription Gastric stomach
8 chr19:21241200-21264800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr19:21241400-21253600 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr19:21241400-21264800 Weak transcription HSMMtube muscle
11 chr19:21241600-21264800 Weak transcription Brain Anterior Caudate brain
12 chr19:21241600-21265000 Weak transcription HMEC breast
13 chr19:21245800-21253400 Weak transcription Fetal Muscle Leg muscle
14 chr19:21247200-21264800 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr19:21247400-21260000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr19:21247400-21264800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr19:21247400-21289600 Weak transcription Aorta Aorta
18 chr19:21247600-21252800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr19:21247600-21264800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr19:21247600-21264800 Weak transcription Ovary ovary
21 chr19:21247800-21264800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr19:21247800-21264800 Weak transcription HSMM muscle
23 chr19:21248400-21256800 Weak transcription Osteobl bone
24 chr19:21248400-21264800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr19:21248400-21264800 Weak transcription Brain Angular Gyrus brain
26 chr19:21248400-21264800 Weak transcription Stomach Smooth Muscle stomach
27 chr19:21248600-21264200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr19:21248600-21264600 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr19:21248600-21264800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr19:21248800-21255800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr19:21248800-21256000 Weak transcription Pancreas Pancrea
32 chr19:21248800-21265000 Weak transcription Left Ventricle heart
33 chr19:21249000-21254200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr19:21249400-21253800 Weak transcription Primary T cells from cord blood blood
35 chr19:21249400-21257800 Weak transcription Fetal Lung lung
36 chr19:21249600-21264400 Weak transcription Primary B cells from cord blood blood
37 chr19:21249800-21265000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr19:21250000-21264800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr19:21250200-21253400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr19:21250200-21264800 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr19:21250400-21264200 Weak transcription Fetal Thymus thymus
42 chr19:21250600-21264200 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr19:21250600-21264200 Weak transcription Thymus Thymus
44 chr19:21250600-21264600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr19:21250800-21264600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr19:21250800-21264800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr19:21250800-21264800 Weak transcription Muscle Satellite Cultured Cells --
48 chr19:21251400-21264800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr19:21251600-21260000 Weak transcription Fetal Intestine Small intestine
50 chr19:21251600-21264800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015