The 2.0 version of rSNPBase

Variant report

Variant rs10426284
Chromosome Location chr19:42850763-42850764
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42830800-42851200 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr19:42830800-42856400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:42830800-42867200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr19:42830800-42867600 Weak transcription Fetal Kidney kidney
5 chr19:42830800-42879200 Weak transcription Small Intestine intestine
6 chr19:42830800-42884200 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr19:42831000-42856200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr19:42831000-42860600 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr19:42831000-42874400 Weak transcription HSMM muscle
10 chr19:42831200-42856600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr19:42831200-42856800 Weak transcription Fetal Thymus thymus
12 chr19:42831400-42867400 Weak transcription Fetal Heart heart
13 chr19:42831400-42867400 Weak transcription NHEK skin
14 chr19:42831600-42856400 Weak transcription HMEC breast
15 chr19:42831600-42856600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr19:42831600-42861800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:42831600-42882600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr19:42831800-42852200 Weak transcription Colon Smooth Muscle Colon
19 chr19:42831800-42873800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr19:42831800-42874800 Weak transcription K562 blood
21 chr19:42833400-42867400 Weak transcription GM12878-XiMat blood
22 chr19:42835400-42867400 Strong transcription Fetal Stomach stomach
23 chr19:42836600-42861000 Weak transcription Psoas Muscle Psoas
24 chr19:42837400-42851600 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr19:42839800-42866800 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr19:42840200-42850800 Weak transcription Primary monocytes fromperipheralblood blood
27 chr19:42841000-42858200 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr19:42841000-42867600 Weak transcription Osteobl bone
29 chr19:42841200-42858400 Weak transcription Rectal Smooth Muscle rectum
30 chr19:42841200-42859600 Weak transcription H1 Cell Line embryonic stem cell
31 chr19:42841400-42851800 Weak transcription Placenta Amnion Placenta Amnion
32 chr19:42841400-42855400 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr19:42841400-42855800 Weak transcription Brain Substantia Nigra brain
34 chr19:42841400-42859800 Weak transcription NHLF lung
35 chr19:42841400-42861000 Weak transcription Primary T cells fromperipheralblood blood
36 chr19:42841400-42865000 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr19:42841600-42851000 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr19:42841600-42851200 Weak transcription Primary B cells from cord blood blood
39 chr19:42841600-42852000 Weak transcription H9 Cell Line embryonic stem cell
40 chr19:42841600-42855400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr19:42841600-42857400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr19:42841600-42860200 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr19:42841600-42860400 Weak transcription A549 lung
44 chr19:42841600-42867800 Weak transcription HepG2 liver
45 chr19:42841800-42860600 Weak transcription Primary hematopoietic stem cells blood
46 chr19:42843400-42867800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr19:42844000-42861800 Strong transcription Fetal Intestine Small intestine
48 chr19:42844000-42867200 Strong transcription Fetal Muscle Trunk muscle
49 chr19:42844200-42856000 Strong transcription Brain Germinal Matrix brain
50 chr19:42844800-42877400 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015