Variant report

Variant rs1042711
Chromosome Location chr5:148206348-148206349
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:148205000-148206400 Active TSS Breast Myoepithelial Primary Cells Breast
2 chr5:148205000-148206400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr5:148205000-148206800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr5:148205000-148206800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr5:148205000-148207000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr5:148205000-148209400 Active TSS Right Ventricle heart
7 chr5:148205200-148206400 Active TSS ES-I3 Cell Line embryonic stem cell
8 chr5:148205200-148206400 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
9 chr5:148205200-148206400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
10 chr5:148205200-148206400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
11 chr5:148205200-148206400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
12 chr5:148205200-148206400 Bivalent/Poised TSS Thymus Thymus
13 chr5:148205200-148206600 Active TSS H9 Cell Line embryonic stem cell
14 chr5:148205200-148206600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr5:148205200-148206600 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:148205200-148206600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
17 chr5:148205200-148206600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
18 chr5:148205200-148206600 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
19 chr5:148205200-148206800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
20 chr5:148205200-148206800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
21 chr5:148205200-148206800 Active TSS Left Ventricle heart
22 chr5:148205200-148207000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
23 chr5:148205200-148207000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
24 chr5:148205200-148207000 Bivalent/Poised TSS Fetal Intestine Small intestine
25 chr5:148205200-148207200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
26 chr5:148205200-148207200 Flanking Active TSS Duodenum Mucosa Duodenum
27 chr5:148205200-148207600 Flanking Active TSS Adipose Nuclei Adipose
28 chr5:148205200-148209200 Active TSS HSMMtube muscle
29 chr5:148205200-148209400 Active TSS Psoas Muscle Psoas
30 chr5:148205200-148209800 Active TSS Brain Angular Gyrus brain
31 chr5:148205200-148211000 Active TSS Right Atrium heart
32 chr5:148205400-148206400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
33 chr5:148205400-148206400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr5:148205400-148206400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:148205400-148206400 Active TSS Fetal Brain Female brain
36 chr5:148205400-148206400 Active TSS Lung lung
37 chr5:148205400-148206400 Active TSS Ovary ovary
38 chr5:148205400-148206400 Active TSS Stomach Mucosa stomach
39 chr5:148205400-148206400 Active TSS Spleen Spleen
40 chr5:148205400-148206400 Flanking Bivalent TSS/Enh HepG2 liver
41 chr5:148205400-148206600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
42 chr5:148205400-148206600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
43 chr5:148205400-148206600 Active TSS Aorta Aorta
44 chr5:148205400-148206600 Active TSS Colon Smooth Muscle Colon
45 chr5:148205400-148206800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr5:148205400-148206800 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
47 chr5:148205400-148206800 Flanking Bivalent TSS/Enh Placenta Placenta
48 chr5:148205400-148207200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
49 chr5:148205400-148207600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
50 chr5:148205400-148209600 Active TSS Fetal Heart heart

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