Variant report

Variant rs1045204
Chromosome Location chr15:34634138-34634139
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34630600-34634200 Weak transcription Aorta Aorta
2 chr15:34630600-34635000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr15:34630800-34634200 Weak transcription Brain Angular Gyrus brain
4 chr15:34630800-34634200 Weak transcription Brain Inferior Temporal Lobe brain
5 chr15:34630800-34634400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:34630800-34634400 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr15:34631800-34634600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr15:34632000-34634400 Genic enhancers Primary T helper cells fromperipheralblood blood
9 chr15:34632400-34634200 Strong transcription Fetal Stomach stomach
10 chr15:34632400-34634200 Genic enhancers Lung lung
11 chr15:34632400-34634400 Genic enhancers Primary T cells fromperipheralblood blood
12 chr15:34633200-34634400 Genic enhancers Primary B cells from peripheral blood blood
13 chr15:34633200-34634400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
14 chr15:34633200-34634800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr15:34633400-34634400 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr15:34633400-34634600 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr15:34633400-34634600 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr15:34633600-34634200 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
19 chr15:34633600-34634200 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr15:34633600-34634200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr15:34633600-34634200 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr15:34633600-34634200 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
23 chr15:34633600-34634200 Enhancers Brain Hippocampus Middle brain
24 chr15:34633600-34634200 Enhancers Placenta Amnion Placenta Amnion
25 chr15:34633600-34634200 Transcr. at gene 5' and 3' GM12878-XiMat blood
26 chr15:34633600-34634200 Transcr. at gene 5' and 3' K562 blood
27 chr15:34633600-34634400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr15:34633600-34634400 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
29 chr15:34633600-34634400 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
30 chr15:34633600-34634400 Enhancers Fetal Lung lung
31 chr15:34633600-34634400 Transcr. at gene 5' and 3' Dnd41 blood
32 chr15:34633600-34634800 Enhancers Small Intestine intestine
33 chr15:34633800-34634200 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
34 chr15:34633800-34634200 Genic enhancers Esophagus oesophagus
35 chr15:34633800-34634200 Genic enhancers Rectal Mucosa Donor 29 rectum
36 chr15:34633800-34634200 Transcr. at gene 5' and 3' HUVEC blood vessel
37 chr15:34633800-34634400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr15:34633800-34634400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
39 chr15:34633800-34634400 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr15:34633800-34634400 Transcr. at gene 5' and 3' Hela-S3 cervix
41 chr15:34633800-34634400 Transcr. at gene 5' and 3' NHEK skin
42 chr15:34633800-34634600 Flanking Active TSS Primary T cells from cord blood blood
43 chr15:34633800-34634800 Flanking Active TSS Primary monocytes fromperipheralblood blood
44 chr15:34633800-34634800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
45 chr15:34633800-34635400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr15:34633800-34635400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
47 chr15:34634000-34634200 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
48 chr15:34634000-34634200 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
49 chr15:34634000-34634200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr15:34634000-34634200 Flanking Active TSS H9 Cell Line embryonic stem cell

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