The 2.0 version of rSNPBase

Variant report

Variant rs10462540
Chromosome Location chr5:75703257-75703258
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:75700000-75703400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
2 chr5:75700000-75703400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr5:75700000-75703600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr5:75700200-75704600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr5:75700600-75707400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr5:75700800-75707200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr5:75701000-75703400 Enhancers Primary T cells from cord blood blood
8 chr5:75701000-75703400 Enhancers K562 blood
9 chr5:75701000-75706200 Weak transcription H1 Cell Line embryonic stem cell
10 chr5:75701000-75721600 Weak transcription Fetal Stomach stomach
11 chr5:75701200-75704400 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr5:75701200-75704400 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr5:75701200-75706800 Enhancers Primary T cells fromperipheralblood blood
14 chr5:75701400-75705400 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr5:75701600-75703800 Enhancers Primary B cells from cord blood blood
16 chr5:75701600-75707200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr5:75701600-75707200 Enhancers Primary T helper cells fromperipheralblood blood
18 chr5:75701600-75713000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr5:75701800-75704400 Enhancers Stomach Mucosa stomach
20 chr5:75701800-75705800 Enhancers Primary monocytes fromperipheralblood blood
21 chr5:75701800-75706600 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr5:75701800-75707000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr5:75702000-75704800 Enhancers Placenta Placenta
24 chr5:75702000-75706400 Enhancers Primary T helper naive cells from peripheral blood blood
25 chr5:75702000-75707800 Enhancers HepG2 liver
26 chr5:75702200-75704400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr5:75702200-75705400 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr5:75702200-75707800 Enhancers Primary T helper cells PMA-I stimulated --
29 chr5:75702400-75703800 Enhancers Duodenum Mucosa Duodenum
30 chr5:75702400-75705400 Enhancers Primary T regulatory cells fromperipheralblood blood
31 chr5:75702600-75703600 Enhancers Rectal Mucosa Donor 29 rectum
32 chr5:75702600-75704200 Weak transcription Fetal Intestine Small intestine
33 chr5:75702600-75704400 Enhancers Liver Liver
34 chr5:75702600-75706200 Enhancers Primary hematopoietic stem cells blood
35 chr5:75702600-75707200 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr5:75702800-75703400 Enhancers Sigmoid Colon Sigmoid Colon
37 chr5:75702800-75704400 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr5:75702800-75704400 Enhancers Pancreas Pancrea
39 chr5:75703000-75703400 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr5:75703000-75731800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr5:75703200-75703400 Enhancers H9 Cell Line embryonic stem cell
42 chr5:75703200-75703600 Flanking Active TSS GM12878-XiMat blood
43 chr5:75703200-75704400 Weak transcription Primary B cells from peripheral blood blood
44 chr5:75703200-75704400 Weak transcription Adipose Nuclei Adipose
45 chr5:75703200-75706800 Weak transcription Gastric stomach
46 chr5:75703200-75717800 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015