The 2.0 version of rSNPBase

Variant report

Variant rs1046690
Chromosome Location chr1:211546501-211546502
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211510600-211555400 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr1:211514800-211552200 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr1:211515000-211555000 Weak transcription Hela-S3 cervix
4 chr1:211515000-211555800 Weak transcription Esophagus oesophagus
5 chr1:211515400-211548400 Weak transcription Stomach Mucosa stomach
6 chr1:211519400-211549000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:211519800-211547400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:211519800-211548600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:211521200-211550200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:211521600-211555200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:211525000-211555600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:211525400-211550200 Weak transcription NHDF-Ad bronchial
13 chr1:211525400-211555000 Weak transcription Fetal Lung lung
14 chr1:211525600-211548200 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr1:211525600-211550200 Weak transcription H9 Cell Line embryonic stem cell
16 chr1:211526600-211555400 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr1:211526800-211550800 Weak transcription Small Intestine intestine
18 chr1:211527400-211550400 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr1:211528000-211551400 Strong transcription Primary B cells from peripheral blood blood
20 chr1:211528200-211550600 Strong transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:211528400-211547600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:211528800-211554600 Weak transcription Psoas Muscle Psoas
23 chr1:211529400-211550400 Strong transcription Fetal Thymus thymus
24 chr1:211529600-211551200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:211530200-211555800 Weak transcription Pancreas Pancrea
26 chr1:211530400-211555200 Weak transcription Brain Anterior Caudate brain
27 chr1:211530600-211548800 Weak transcription Fetal Intestine Small intestine
28 chr1:211530600-211550000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:211530600-211555600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:211531000-211551600 Weak transcription NHLF lung
31 chr1:211531200-211550000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:211531200-211550000 Weak transcription HSMM muscle
33 chr1:211533400-211547200 Weak transcription Spleen Spleen
34 chr1:211533400-211550200 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr1:211533400-211551200 Strong transcription Primary T cells fromperipheralblood blood
36 chr1:211533400-211552000 Weak transcription Muscle Satellite Cultured Cells --
37 chr1:211533800-211554800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:211534600-211547400 Weak transcription HSMMtube muscle
39 chr1:211534600-211555800 Weak transcription Gastric stomach
40 chr1:211535000-211549800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr1:211535000-211555000 Weak transcription A549 lung
42 chr1:211535400-211555800 Weak transcription Left Ventricle heart
43 chr1:211537200-211551200 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr1:211538000-211546800 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr1:211538800-211548200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:211539600-211550000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:211539800-211555400 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr1:211540000-211548400 Weak transcription H1 Cell Line embryonic stem cell
49 chr1:211540000-211550600 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr1:211540200-211547400 Weak transcription Ovary ovary

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Last update: Aug 31, 2015