The 2.0 version of rSNPBase

Variant report

Variant rs10471502
Chromosome Location chr5:60369083-60369084
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60326000-60400800 Weak transcription Left Ventricle heart
2 chr5:60347200-60379200 Weak transcription Ovary ovary
3 chr5:60349400-60370800 Weak transcription HSMM muscle
4 chr5:60350400-60371400 Weak transcription NHDF-Ad bronchial
5 chr5:60350600-60378600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr5:60350800-60396200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr5:60362800-60377200 Weak transcription Psoas Muscle Psoas
8 chr5:60363000-60369200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr5:60365200-60372400 Weak transcription Dnd41 blood
10 chr5:60365600-60369200 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr5:60365600-60376400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr5:60365600-60387000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr5:60366400-60397400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr5:60367200-60382200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr5:60367400-60369200 Weak transcription Primary T cells fromperipheralblood blood
16 chr5:60367400-60369800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr5:60367400-60379400 Weak transcription HMEC breast
18 chr5:60367400-60385200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr5:60367400-60386800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr5:60367400-60399400 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr5:60367600-60369200 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr5:60367600-60369200 Weak transcription Duodenum Mucosa Duodenum
23 chr5:60367600-60370600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr5:60367600-60370800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr5:60367600-60372200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr5:60367600-60372600 Weak transcription NHEK skin
27 chr5:60367600-60378400 Weak transcription Primary T cells from cord blood blood
28 chr5:60367600-60380000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr5:60367600-60380000 Weak transcription Liver Liver
30 chr5:60367600-60398400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr5:60367800-60369400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr5:60367800-60372400 Weak transcription Primary hematopoietic stem cells blood
33 chr5:60367800-60372400 Weak transcription NH-A brain
34 chr5:60367800-60403800 Weak transcription Primary B cells from cord blood blood
35 chr5:60368000-60371400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr5:60368000-60372400 Weak transcription Brain Anterior Caudate brain
37 chr5:60368000-60372600 Weak transcription A549 lung
38 chr5:60368200-60374800 Weak transcription Fetal Intestine Large intestine
39 chr5:60368200-60377600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr5:60368200-60390600 Weak transcription Fetal Intestine Small intestine
41 chr5:60368200-60397600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr5:60368200-60402000 Weak transcription Stomach Smooth Muscle stomach
43 chr5:60368400-60370600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr5:60368400-60390200 Weak transcription Brain Inferior Temporal Lobe brain
45 chr5:60368600-60370800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr5:60368600-60378400 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr5:60368600-60381200 Weak transcription K562 blood
48 chr5:60368800-60371400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr5:60369000-60370000 Strong transcription Primary B cells from peripheral blood blood
50 chr5:60369000-60371200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015