Variant report

Variant	rs104933
Chromosome Location	chr7:101815214-101815215
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:101812896..101815605-chr7:101816057..101818792,2	K562	blood:
2	chr7:101798034..101799716-chr7:101813245..101815960,2	MCF-7	breast:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10263474	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11972888	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11973970	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11977667	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11982785	0.93[EUR][1000 genomes]
rs17135076	1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1734614	1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2051962	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2529097	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34746794	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs364466	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs380967	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs388592	1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs389224	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs392286	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs397479	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs411030	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs424941	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs436090	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs442030	1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs446513	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57673817	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59476027	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59822540	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6954742	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6969463	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73408058	0.83[EUR][1000 genomes]
rs73408093	0.95[EUR][1000 genomes]
rs73408094	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73412026	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73412034	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73412036	0.88[EUR][1000 genomes]
rs965863	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]

No data

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101784800-101821600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
2	chr7:101784800-101822600	Weak transcription	Primary T helper cells PMA-I stimulated	--
3	chr7:101794800-101816800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr7:101797200-101818400	Weak transcription	Colon Smooth Muscle	Colon
5	chr7:101797200-101818600	Weak transcription	Rectal Smooth Muscle	rectum
6	chr7:101797200-101821400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:101797200-101827800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr7:101797200-101832000	Weak transcription	Fetal Heart	heart
9	chr7:101797800-101852200	Weak transcription	NHEK	skin
10	chr7:101800400-101850000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
11	chr7:101800600-101851800	Strong transcription	Fetal Intestine Small	intestine
12	chr7:101801200-101819800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr7:101801200-101864000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr7:101805400-101862200	Strong transcription	Primary neutrophils fromperipheralblood	blood
15	chr7:101807400-101821400	Weak transcription	Aorta	Aorta
16	chr7:101808000-101820800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr7:101808200-101817000	Weak transcription	Colonic Mucosa	Colon
18	chr7:101808200-101818600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr7:101808200-101821400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr7:101808200-101824200	Strong transcription	Dnd41	blood
21	chr7:101808200-101840200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
22	chr7:101808400-101868400	Strong transcription	Thymus	Thymus
23	chr7:101810000-101816600	Weak transcription	Primary B cells from peripheral blood	blood
24	chr7:101810000-101821600	Weak transcription	Esophagus	oesophagus
25	chr7:101810400-101816800	Weak transcription	Gastric	stomach
26	chr7:101810400-101820800	Weak transcription	Right Ventricle	heart
27	chr7:101811800-101819800	Strong transcription	Primary T cells from cord blood	blood
28	chr7:101812400-101822600	Weak transcription	Small Intestine	intestine
29	chr7:101812400-101860800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
30	chr7:101812600-101863200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr7:101812600-101867000	Strong transcription	Primary monocytes fromperipheralblood	blood
32	chr7:101812600-101867000	Strong transcription	Monocytes-CD14+_RO01746	blood
33	chr7:101812800-101817800	Strong transcription	Rectal Mucosa Donor 29	rectum
34	chr7:101812800-101819400	Strong transcription	Fetal Thymus	thymus
35	chr7:101813000-101816600	Weak transcription	Left Ventricle	heart
36	chr7:101813200-101815800	Strong transcription	Skeletal Muscle Male	skeletal muscle
37	chr7:101813200-101823600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr7:101813200-101852000	Weak transcription	NHDF-Ad	bronchial
39	chr7:101813400-101815400	Weak transcription	H1 Cell Line	embryonic stem cell
40	chr7:101813400-101832000	Strong transcription	Fetal Stomach	stomach
41	chr7:101813600-101817400	Strong transcription	HUES64 Cell Line	embryonic stem cell
42	chr7:101813600-101818800	Strong transcription	Liver	Liver
43	chr7:101813600-101821600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr7:101813600-101832200	Weak transcription	NHLF	lung
45	chr7:101813800-101815400	Strong transcription	Primary B cells from cord blood	blood
46	chr7:101813800-101815600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr7:101813800-101815800	Strong transcription	H9 Cell Line	embryonic stem cell
48	chr7:101813800-101817400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
49	chr7:101813800-101817600	Strong transcription	HUES6 Cell Line	embryonic stem cell
50	chr7:101813800-101818000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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