Variant report

Variant	rs10495713
Chromosome Location	chr2:21200519-21200520
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1318004	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1318006	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1320143	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1320144	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1320145	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1344063	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17041662	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17041663	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17041679	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2337382	0.90[EUR][1000 genomes]
rs34059329	0.95[EUR][1000 genomes]
rs34335269	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35131127	0.96[EUR][1000 genomes]
rs35893087	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3923037	0.80[ASN][1000 genomes]
rs4665639	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4665642	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4665790	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56213756	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56327713	0.96[EUR][1000 genomes]
rs56403064	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62120841	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6707950	0.96[EUR][1000 genomes]
rs6721844	0.92[EUR][1000 genomes]
rs6722374	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6733447	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7571469	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9789416	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21195000-21201000	Enhancers	Stomach Smooth Muscle	stomach
2	chr2:21195600-21200600	Weak transcription	Fetal Kidney	kidney
3	chr2:21199000-21200800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr2:21199000-21201200	Enhancers	Aorta	Aorta
5	chr2:21199200-21201200	Enhancers	Lung	lung
6	chr2:21199200-21201400	Enhancers	Fetal Muscle Leg	muscle
7	chr2:21199200-21201600	Enhancers	Adipose Nuclei	Adipose
8	chr2:21199400-21200600	Enhancers	Fetal Muscle Trunk	muscle
9	chr2:21199400-21201400	Enhancers	Fetal Stomach	stomach
10	chr2:21200000-21206400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr2:21200200-21204400	Weak transcription	Spleen	Spleen
12	chr2:21200200-21207000	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr2:21200400-21201200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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