Variant report
| Variant | rs10502561 |
|---|---|
| Chromosome Location | chr18:28824981-28824982 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:28820200-28826000 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 2 | chr18:28820600-28828000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 3 | chr18:28820800-28826200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 4 | chr18:28821200-28826000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr18:28821400-28825200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 6 | chr18:28822200-28826800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr18:28823200-28826000 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 8 | chr18:28823600-28825000 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr18:28823600-28825000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 10 | chr18:28823600-28825200 | Enhancers | H1 Cell Line | embryonic stem cell |
| 11 | chr18:28823600-28825400 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 12 | chr18:28823600-28825400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 13 | chr18:28823600-28825400 | Enhancers | Placenta Amnion | Placenta Amnion |
| 14 | chr18:28823600-28825800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 15 | chr18:28823800-28825200 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr18:28823800-28825200 | Enhancers | H9 Cell Line | embryonic stem cell |
| 17 | chr18:28823800-28825200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr18:28823800-28825200 | Flanking Active TSS | Liver | Liver |
| 19 | chr18:28823800-28825200 | Flanking Active TSS | NHEK | skin |
| 20 | chr18:28823800-28825400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 21 | chr18:28823800-28826000 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 22 | chr18:28824000-28825000 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 23 | chr18:28824000-28825400 | Flanking Active TSS | A549 | lung |
| 24 | chr18:28824000-28826200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 25 | chr18:28824200-28825400 | Enhancers | HUVEC | blood vessel |
| 26 | chr18:28824200-28826000 | Enhancers | Fetal Lung | lung |
| 27 | chr18:28824200-28826400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 28 | chr18:28824200-28827000 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr18:28824200-28827600 | Weak transcription | Pancreas | Pancrea |
| 30 | chr18:28824400-28825400 | Enhancers | NH-A | brain |
| 31 | chr18:28824600-28825000 | Active TSS | Brain Anterior Caudate | brain |
| 32 | chr18:28824600-28825200 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 33 | chr18:28824600-28825200 | Flanking Active TSS | Fetal Intestine Large | intestine |
| 34 | chr18:28824600-28825200 | Flanking Active TSS | Fetal Intestine Small | intestine |
| 35 | chr18:28824600-28825400 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 36 | chr18:28824600-28825400 | Active TSS | Duodenum Mucosa | Duodenum |
| 37 | chr18:28824600-28825400 | Flanking Active TSS | GM12878-XiMat | blood |
| 38 | chr18:28824600-28825800 | Weak transcription | Colonic Mucosa | Colon |
| 39 | chr18:28824600-28826000 | Enhancers | Brain Germinal Matrix | brain |
| 40 | chr18:28824800-28825000 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 41 | chr18:28824800-28825000 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 42 | chr18:28824800-28825000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 43 | chr18:28824800-28825000 | Active TSS | HepG2 | liver |
| 44 | chr18:28824800-28825200 | Active TSS | Brain Cingulate Gyrus | brain |
| 45 | chr18:28824800-28825200 | Flanking Active TSS | Brain Substantia Nigra | brain |
| 46 | chr18:28824800-28825200 | Flanking Active TSS | Fetal Kidney | kidney |
| 47 | chr18:28824800-28825200 | Flanking Active TSS | Pancreatic Islets | Pancreatic Islet |
| 48 | chr18:28824800-28825200 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 49 | chr18:28824800-28825200 | Active TSS | Right Atrium | heart |
| 50 | chr18:28824800-28825200 | Enhancers | Small Intestine | intestine |
