Variant report

Variant	rs10503958
Chromosome Location	chr8:34183642-34183643
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1562183	0.96[ASN][1000 genomes]
rs16882013	0.98[ASN][1000 genomes]
rs16882016	0.98[ASN][1000 genomes]
rs16882072	0.94[ASN][1000 genomes]
rs16882098	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4289807	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4739475	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4739543	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60730442	0.96[ASN][1000 genomes]
rs716225	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73674310	1.00[ASN][1000 genomes]
rs73674323	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv610931	chr8:34176474-34226215	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34181200-34184400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr8:34181800-34184800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr8:34181800-34185400	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr8:34182000-34184800	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr8:34182000-34185600	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr8:34182200-34183800	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr8:34182600-34184000	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr8:34182800-34184000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr8:34182800-34184000	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr8:34182800-34184400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr8:34183000-34184000	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr8:34183400-34185400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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