Variant report

Variant	rs10598155
Chromosome Location	chr4:100509974-100509975
allele	-/AT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879656	chr4:99976646-100533722	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv933074	chr4:100460951-100630600	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	esv3410965	chr4:100509154-100511252	Enhancers Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv3377330	chr4:100509589-100510392	Enhancers Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv289933	chr4:100509846-100509987	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv252704	chr4:100509973-100509974	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	esv1782768	chr4:100509973-100509975	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
8	nsv285788	chr4:100509974-100509975	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100506200-100516000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:100506800-100510800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:100507800-100510400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr4:100507800-100533800	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr4:100508800-100510400	Weak transcription	Liver	Liver
6	chr4:100508800-100514000	Strong transcription	HepG2	liver
7	chr4:100509000-100511400	Weak transcription	Duodenum Mucosa	Duodenum
8	chr4:100509000-100516000	Weak transcription	Aorta	Aorta
9	chr4:100509600-100510600	Genic enhancers	Fetal Intestine Large	intestine
10	chr4:100509800-100510200	Weak transcription	Fetal Intestine Small	intestine
11	chr4:100509800-100518200	Weak transcription	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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