Variant report

Variant	rs1071807
Chromosome Location	chr14:69385195-69385196
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69377931..69381978-chr14:69382009..69387098,5	MCF-7	breast:
2	chr14:69371492..69373518-chr14:69384309..69387019,2	K562	blood:

rs_ID	r²[population]
rs10115825	0.82[AFR][1000 genomes]
rs10491595	0.82[AFR][1000 genomes]
rs10491596	0.80[AFR][1000 genomes]
rs10815384	0.82[AFR][1000 genomes]
rs10815385	0.82[AFR][1000 genomes]
rs10815387	0.82[AFR][1000 genomes]
rs10815389	0.82[AFR][1000 genomes]
rs10975476	0.80[AFR][1000 genomes]
rs10975478	0.82[AFR][1000 genomes]
rs10975492	0.87[AFR][1000 genomes]
rs10975502	0.82[AFR][1000 genomes]
rs10975503	0.82[AFR][1000 genomes]
rs12056972	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs12056978	0.81[AMR][1000 genomes]
rs12056988	0.81[AMR][1000 genomes]
rs12057074	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs12238166	0.82[AFR][1000 genomes]
rs12337054	0.82[AFR][1000 genomes]
rs12337056	0.82[AFR][1000 genomes]
rs12339054	0.82[AFR][1000 genomes]
rs16924585	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs28744560	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs72691307	0.81[AMR][1000 genomes]
rs72691308	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs7874205	0.81[AMR][1000 genomes]

SNP	Gene	Cis/trans	Tissue	Source
rs1071807	ANKRD15	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69337400-69404400	Weak transcription	Fetal Brain Male	brain
2	chr14:69339200-69394600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr14:69345800-69394800	Weak transcription	Small Intestine	intestine
4	chr14:69348200-69389200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr14:69354000-69393200	Strong transcription	NHEK	skin
6	chr14:69354600-69393000	Strong transcription	Dnd41	blood
7	chr14:69360600-69388800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr14:69362600-69389200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr14:69362600-69393400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr14:69369000-69391200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr14:69372400-69404400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr14:69372600-69388200	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr14:69376000-69385600	Weak transcription	K562	blood
14	chr14:69376000-69388600	Weak transcription	Primary hematopoietic stem cells	blood
15	chr14:69376000-69389400	Weak transcription	Brain Inferior Temporal Lobe	brain
16	chr14:69376000-69395400	Weak transcription	Brain Angular Gyrus	brain
17	chr14:69376200-69386200	Weak transcription	Duodenum Mucosa	Duodenum
18	chr14:69376400-69385800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr14:69376600-69392400	Weak transcription	Brain Germinal Matrix	brain
20	chr14:69377200-69386000	Weak transcription	Placenta	Placenta
21	chr14:69377200-69386200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
22	chr14:69378200-69389200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr14:69378800-69385600	Weak transcription	Fetal Thymus	thymus
24	chr14:69378800-69388400	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr14:69378800-69394000	Weak transcription	Stomach Mucosa	stomach
26	chr14:69378800-69402400	Weak transcription	Brain Cingulate Gyrus	brain
27	chr14:69379000-69385400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr14:69379000-69385600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr14:69379000-69386000	Weak transcription	Adipose Nuclei	Adipose
30	chr14:69379000-69386400	Weak transcription	Fetal Kidney	kidney
31	chr14:69379000-69387400	Weak transcription	Colonic Mucosa	Colon
32	chr14:69379000-69388400	Strong transcription	NH-A	brain
33	chr14:69379200-69385600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
34	chr14:69379600-69385600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
35	chr14:69380200-69389200	Strong transcription	Sigmoid Colon	Sigmoid Colon
36	chr14:69380200-69389400	Strong transcription	Liver	Liver
37	chr14:69380200-69392600	Strong transcription	HUVEC	blood vessel
38	chr14:69380600-69385600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr14:69380600-69386000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr14:69380600-69388400	Weak transcription	Skeletal Muscle Male	skeletal muscle
41	chr14:69380600-69388400	Strong transcription	HMEC	breast
42	chr14:69380600-69389800	Strong transcription	Lung	lung
43	chr14:69380800-69387800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr14:69380800-69388400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr14:69380800-69388800	Weak transcription	Right Atrium	heart
46	chr14:69380800-69389800	Strong transcription	Osteobl	bone
47	chr14:69381000-69388600	Strong transcription	HSMMtube	muscle
48	chr14:69381400-69387600	Strong transcription	HSMM	muscle
49	chr14:69381400-69388400	Strong transcription	A549	lung
50	chr14:69381600-69388800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell

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