Variant report

Variant	rs10733295
Chromosome Location	chr9:15681901-15681902
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 224 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:210)

rs_ID	r²[population]
rs1009468	0.82[GIH][hapmap];0.86[MEX][hapmap];0.80[TSI][hapmap]
rs10118359	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10119975	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10121393	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10121591	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10122339	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10123042	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10481557	0.89[CEU][hapmap]
rs10733305	0.89[CEU][hapmap]
rs10738399	0.82[EUR][1000 genomes]
rs10738417	0.89[CEU][hapmap]
rs10756671	0.81[CEU][hapmap]
rs10756674	0.89[CEU][hapmap];0.85[GIH][hapmap];0.81[TSI][hapmap]
rs10756677	0.89[CEU][hapmap];0.94[CHB][hapmap];0.90[CHD][hapmap];0.87[GIH][hapmap]
rs10756679	0.85[CEU][hapmap]
rs10756686	0.85[CEU][hapmap];0.94[CHB][hapmap];0.88[JPT][hapmap];0.80[ASN][1000 genomes]
rs10756687	0.89[CEU][hapmap];0.83[CHB][hapmap];0.88[CHD][hapmap];0.87[GIH][hapmap];0.83[JPT][hapmap];0.83[TSI][hapmap]
rs10756688	0.94[ASW][hapmap];0.89[CEU][hapmap];0.89[CHB][hapmap];0.90[CHD][hapmap];0.87[GIH][hapmap];0.89[JPT][hapmap];0.82[MEX][hapmap];0.83[TSI][hapmap];0.84[ASN][1000 genomes]
rs10756689	0.89[CEU][hapmap];0.89[CHB][hapmap];0.83[JPT][hapmap];0.84[ASN][1000 genomes]
rs10756690	0.89[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10756691	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10756697	0.85[CEU][hapmap]
rs10756704	0.81[CEU][hapmap]
rs10810397	0.92[CEU][hapmap];0.83[EUR][1000 genomes]
rs10810399	0.89[CEU][hapmap]
rs10810401	0.89[CEU][hapmap]
rs10810402	0.85[CEU][hapmap];0.85[GIH][hapmap];0.81[TSI][hapmap]
rs10810408	0.89[CEU][hapmap];0.85[GIH][hapmap]
rs10810416	1.00[CEU][hapmap];0.93[YRI][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10810419	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10810422	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10810424	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10810426	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10810427	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10810428	0.89[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];0.90[JPT][hapmap];0.82[MEX][hapmap];0.83[TSI][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10810429	1.00[CEU][hapmap];0.83[CHB][hapmap];0.86[YRI][hapmap];0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10810430	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10810438	0.96[CEU][hapmap];0.83[CHB][hapmap];0.83[YRI][hapmap];0.89[EUR][1000 genomes]
rs10810439	0.89[CEU][hapmap]
rs10810440	0.96[CEU][hapmap];0.89[CHB][hapmap];0.85[GIH][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.83[YRI][hapmap];0.81[EUR][1000 genomes]
rs10810446	0.89[CEU][hapmap]
rs10810455	0.89[CEU][hapmap]
rs10810461	0.81[CEU][hapmap]
rs10962066	0.89[CEU][hapmap];0.85[GIH][hapmap];0.80[TSI][hapmap]
rs10962070	0.89[CEU][hapmap]
rs10962098	0.89[CEU][hapmap];0.89[CHB][hapmap]
rs10962099	0.89[CEU][hapmap];0.89[CHB][hapmap]
rs10962106	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10962110	0.85[CEU][hapmap]
rs10962118	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10962121	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10962123	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10962125	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10962126	1.00[CEU][hapmap];0.89[CHB][hapmap];0.85[CHD][hapmap];0.96[GIH][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.82[YRI][hapmap];0.94[EUR][1000 genomes]
rs10962147	0.89[CEU][hapmap];0.82[YRI][hapmap]
rs10962149	0.81[CEU][hapmap]
rs10962151	0.81[CEU][hapmap]
rs10962152	0.89[CEU][hapmap];0.82[YRI][hapmap]
rs10962153	0.85[CEU][hapmap];0.82[YRI][hapmap]
rs10962156	0.89[CEU][hapmap];0.82[YRI][hapmap]
rs10962157	0.81[CEU][hapmap]
rs10962158	0.81[CEU][hapmap]
rs11792937	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11793900	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12004358	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12340969	0.85[CEU][hapmap];0.83[CHB][hapmap];0.83[JPT][hapmap]
rs12341679	0.96[CEU][hapmap];0.89[CHB][hapmap];0.93[GIH][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.82[EUR][1000 genomes]
rs12349323	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12352779	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12377371	0.96[CEU][hapmap];0.89[EUR][1000 genomes]
rs12378499	0.89[CEU][hapmap]
rs13287834	0.89[CEU][hapmap]
rs13301516	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1341734	0.83[YRI][hapmap]
rs1355171	1.00[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.89[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1396706	0.93[CEU][hapmap];0.83[YRI][hapmap];0.91[EUR][1000 genomes]
rs1396707	0.85[CEU][hapmap];0.88[CHB][hapmap];0.90[CHD][hapmap];0.91[GIH][hapmap];0.83[TSI][hapmap]
rs1396708	0.85[CEU][hapmap]
rs1533040	0.89[CEU][hapmap];0.83[CHB][hapmap];0.84[CHD][hapmap];0.89[GIH][hapmap];0.89[JPT][hapmap];0.83[TSI][hapmap];0.80[ASN][1000 genomes]
rs1539171	0.85[CEU][hapmap];0.85[CHD][hapmap];0.96[GIH][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap]
rs1539172	0.89[CEU][hapmap];0.82[MEX][hapmap];0.91[TSI][hapmap]
rs1539173	0.89[CEU][hapmap];0.82[YRI][hapmap]
rs1553728	0.85[CEU][hapmap];0.89[CHB][hapmap];0.85[JPT][hapmap];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs169342	1.00[CEU][hapmap];0.89[CHB][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs183928	1.00[CEU][hapmap];0.89[CHB][hapmap];0.89[YRI][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1848582	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs192466	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs2055772	0.89[CEU][hapmap];0.85[GIH][hapmap]
rs2096121	0.82[YRI][hapmap]
rs2105317	0.81[CEU][hapmap]
rs2153727	0.80[TSI][hapmap]
rs2175080	0.94[ASW][hapmap];0.96[CEU][hapmap];0.89[CHB][hapmap];0.94[CHD][hapmap];0.98[GIH][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.89[YRI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2175082	0.82[CEU][hapmap];0.82[CHB][hapmap];0.88[CHD][hapmap];0.85[GIH][hapmap];0.83[JPT][hapmap]
rs2185663	0.89[CEU][hapmap]
rs2382532	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2382534	0.85[CEU][hapmap];0.89[CHB][hapmap]
rs2382540	0.89[CEU][hapmap];0.82[YRI][hapmap]
rs2457265	0.86[EUR][1000 genomes]
rs2663300	0.88[EUR][1000 genomes]
rs276432	0.86[EUR][1000 genomes]
rs276433	0.82[EUR][1000 genomes]
rs276435	1.00[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.86[YRI][hapmap];0.84[EUR][1000 genomes]
rs276436	1.00[CEU][hapmap];0.89[CHB][hapmap];0.88[EUR][1000 genomes]
rs276441	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs276443	0.86[EUR][1000 genomes]
rs276444	0.88[EUR][1000 genomes]
rs276448	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs276449	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs276453	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs276454	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs276455	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2821545	0.92[CEU][hapmap];0.98[GIH][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs28403566	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28410434	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs28785887	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3119699	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs3122702	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35057009	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs36086644	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4146290	0.81[CEU][hapmap]
rs4146291	0.81[CEU][hapmap]
rs432452	1.00[CEU][hapmap];0.85[YRI][hapmap];0.90[EUR][1000 genomes]
rs433849	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs4339736	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs442549	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs451878	1.00[CEU][hapmap];0.83[CHB][hapmap];0.84[CHD][hapmap];1.00[GIH][hapmap];0.83[JPT][hapmap];0.95[TSI][hapmap];0.82[YRI][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4740614	0.83[ASW][hapmap];0.96[CEU][hapmap];0.98[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.86[YRI][hapmap];0.85[EUR][1000 genomes]
rs4740615	0.89[CEU][hapmap];0.87[GIH][hapmap];0.80[TSI][hapmap]
rs4740619	0.84[ASW][hapmap];0.89[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.87[GIH][hapmap];0.89[JPT][hapmap];0.83[TSI][hapmap];0.80[ASN][1000 genomes]
rs4740620	0.80[ASN][1000 genomes]
rs4740624	0.89[CEU][hapmap]
rs4741516	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4741519	0.89[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap]
rs4741522	0.81[EUR][1000 genomes]
rs4741528	0.84[ASW][hapmap];0.89[CEU][hapmap];0.89[CHB][hapmap];0.94[CHD][hapmap];0.89[GIH][hapmap];0.83[JPT][hapmap];0.82[MEX][hapmap];0.83[TSI][hapmap];0.83[ASN][1000 genomes]
rs4741534	0.85[CEU][hapmap];0.83[CHB][hapmap];0.94[CHD][hapmap];0.91[GIH][hapmap];0.83[TSI][hapmap]
rs4741535	0.85[CEU][hapmap]
rs59883669	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62573118	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6474930	0.86[EUR][1000 genomes]
rs6474931	0.88[CEU][hapmap];0.94[CHB][hapmap];0.83[JPT][hapmap]
rs6474942	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6474944	0.94[ASW][hapmap];0.89[CEU][hapmap];0.94[CHB][hapmap];0.90[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.81[TSI][hapmap];0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6474945	0.89[CEU][hapmap];0.94[CHB][hapmap];0.90[JPT][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6474946	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6474951	0.96[CEU][hapmap];0.89[CHB][hapmap];0.89[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6474952	0.94[ASW][hapmap];0.96[CEU][hapmap];0.89[CHB][hapmap];0.94[CHD][hapmap];0.98[GIH][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.89[YRI][hapmap];0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6474954	0.82[ASW][hapmap];0.85[CEU][hapmap];0.83[CHB][hapmap];0.94[CHD][hapmap];0.91[GIH][hapmap];0.83[TSI][hapmap]
rs6474962	0.82[EUR][1000 genomes]
rs6474963	0.80[EUR][1000 genomes]
rs6474964	0.80[EUR][1000 genomes]
rs6474966	0.82[CHB][hapmap]
rs6474967	0.80[TSI][hapmap]
rs6474974	0.81[CEU][hapmap]
rs7019205	0.82[GIH][hapmap];0.86[MEX][hapmap]
rs7019430	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7019851	0.89[CEU][hapmap];0.81[CHD][hapmap];0.85[GIH][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap]
rs7023275	1.00[CEU][hapmap];0.83[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];0.83[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7024640	0.82[ASW][hapmap];0.85[CEU][hapmap];0.89[CHB][hapmap];0.94[CHD][hapmap];0.89[GIH][hapmap];0.83[TSI][hapmap]
rs7025420	0.80[EUR][1000 genomes]
rs7025669	0.89[CEU][hapmap];0.89[CHB][hapmap];0.83[JPT][hapmap];0.84[ASN][1000 genomes]
rs7028999	0.85[EUR][1000 genomes]
rs7030846	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7031365	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7032457	0.82[GIH][hapmap];0.91[MEX][hapmap];0.80[TSI][hapmap]
rs7032755	0.89[ASW][hapmap];0.82[CEU][hapmap];0.81[CHD][hapmap];0.87[GIH][hapmap];0.89[JPT][hapmap]
rs7034484	1.00[CEU][hapmap];0.87[CHB][hapmap];0.82[JPT][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7034781	0.96[CEU][hapmap];0.83[CHB][hapmap];0.81[CHD][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.83[YRI][hapmap];0.81[EUR][1000 genomes]
rs7035863	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7036172	0.89[CEU][hapmap];0.84[ASN][1000 genomes]
rs7036285	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7036674	0.87[CEU][hapmap];0.87[CHB][hapmap];0.87[JPT][hapmap];0.84[ASN][1000 genomes]
rs7036875	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7037662	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7037908	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7042475	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7043770	0.89[CEU][hapmap]
rs7045018	0.81[CEU][hapmap]
rs7046351	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7049176	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7389629	0.89[CEU][hapmap]
rs7467156	0.96[CEU][hapmap];0.89[CHB][hapmap];0.83[YRI][hapmap]
rs7467207	0.96[CEU][hapmap];0.83[CHB][hapmap];0.81[CHD][hapmap];0.93[GIH][hapmap];0.95[TSI][hapmap]
rs770524	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs7847144	0.85[CEU][hapmap];0.89[CHB][hapmap];0.94[CHD][hapmap];0.91[GIH][hapmap];0.83[TSI][hapmap]
rs7848511	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7851056	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7853744	0.84[GIH][hapmap];0.82[MEX][hapmap];0.82[TSI][hapmap]
rs7854714	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7859780	0.89[CEU][hapmap]
rs7860024	0.83[EUR][1000 genomes]
rs7860528	0.93[CEU][hapmap]
rs7860755	0.81[CEU][hapmap]
rs7860869	0.96[CEU][hapmap];0.83[YRI][hapmap];0.90[EUR][1000 genomes]
rs7863088	0.89[CEU][hapmap];0.94[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.89[JPT][hapmap];0.82[TSI][hapmap]
rs7866641	0.82[MEX][hapmap]
rs7869624	0.84[CHD][hapmap];0.81[GIH][hapmap];0.86[MEX][hapmap];0.85[TSI][hapmap];0.83[YRI][hapmap]
rs7872912	0.83[YRI][hapmap]
rs7873152	0.83[ASW][hapmap];1.00[CEU][hapmap];0.98[GIH][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.86[YRI][hapmap];0.85[EUR][1000 genomes]
rs7873776	0.81[CEU][hapmap]
rs7874533	0.88[CEU][hapmap];0.82[GIH][hapmap];0.83[TSI][hapmap]
rs7875367	1.00[CEU][hapmap];0.98[GIH][hapmap];0.86[MEX][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs9298740	0.96[CEU][hapmap];0.81[YRI][hapmap]
rs9298741	0.96[CEU][hapmap]
rs9406537	0.82[GIH][hapmap];0.82[MEX][hapmap];0.80[TSI][hapmap]
rs9407624	0.87[EUR][1000 genomes]
rs9407654	0.82[GIH][hapmap]
rs954663	1.00[CEU][hapmap];0.89[CHB][hapmap];0.89[YRI][hapmap];0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs954664	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs955369	0.81[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv892625	chr9:15326251-16064850	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv892626	chr9:15389610-15694690	Flanking Active TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
3	nsv892627	chr9:15397969-15909450	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
4	nsv892630	chr9:15554960-15694690	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	esv2752286	chr9:15578017-15794897	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	nsv892631	chr9:15590116-15694690	Weak transcription ZNF genes & repeats Genic enhancers Enhancers Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
7	nsv892632	chr9:15590116-15869845	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
8	nsv892633	chr9:15604746-15889411	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
9	nsv613656	chr9:15615321-15696501	Enhancers Strong transcription ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv466262	chr9:15615321-15727518	ZNF genes & repeats Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	nsv613657	chr9:15615321-15727518	ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv613658	chr9:15636260-15727518	Strong transcription Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	nsv466263	chr9:15641279-15726057	Enhancers Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	nsv613659	chr9:15641279-15726057	Strong transcription ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs10733295	C9orf93	cis	cerebellum	SCAN
rs10733295	ADAMTSL1	cis	parietal	SCAN
rs10733295	C9orf93	cis	parietal	SCAN

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15645600-15689200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr9:15655200-15691600	Weak transcription	Thymus	Thymus
3	chr9:15669000-15720800	Weak transcription	Gastric	stomach
4	chr9:15672000-15688600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr9:15675000-15699000	Weak transcription	Left Ventricle	heart
6	chr9:15676400-15688600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr9:15676600-15725000	Weak transcription	Pancreas	Pancrea
8	chr9:15677000-15695200	Weak transcription	Fetal Thymus	thymus
9	chr9:15679800-15746800	Weak transcription	Ovary	ovary
10	chr9:15680000-15686600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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