The 2.0 version of rSNPBase

Variant report

Variant rs10747454
Chromosome Location chr1:93429247-93429248
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93427800-93433800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:93428000-93429400 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr1:93428000-93430200 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr1:93428000-93431600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:93428000-93431800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr1:93428000-93432200 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr1:93428000-93434200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr1:93428200-93430200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:93428200-93431400 Enhancers Primary B cells from peripheral blood blood
10 chr1:93428200-93431400 Enhancers Primary T regulatory cells fromperipheralblood blood
11 chr1:93428200-93431600 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr1:93428200-93432000 Enhancers Fetal Thymus thymus
13 chr1:93428200-93432200 Enhancers Primary T cells fromperipheralblood blood
14 chr1:93428200-93432200 Enhancers Primary T helper cells fromperipheralblood blood
15 chr1:93428200-93433600 Weak transcription Primary hematopoietic stem cells blood
16 chr1:93428200-93433600 Weak transcription Hela-S3 cervix
17 chr1:93428200-93438400 Weak transcription Brain Angular Gyrus brain
18 chr1:93428400-93430200 Weak transcription Small Intestine intestine
19 chr1:93428400-93430800 Enhancers Dnd41 blood
20 chr1:93428400-93431000 Enhancers Primary B cells from cord blood blood
21 chr1:93428400-93433600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:93428400-93433600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:93428400-93433600 Weak transcription Brain Anterior Caudate brain
24 chr1:93428400-93433600 Weak transcription Brain Hippocampus Middle brain
25 chr1:93428400-93433600 Weak transcription Fetal Heart heart
26 chr1:93428400-93435000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:93428400-93438200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:93428400-93445800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr1:93428600-93429800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:93428600-93430000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr1:93428600-93430200 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr1:93428600-93431600 Enhancers Thymus Thymus
33 chr1:93428600-93436800 Weak transcription NHEK skin
34 chr1:93428800-93429400 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
35 chr1:93428800-93429800 Enhancers Primary T cells from cord blood blood
36 chr1:93429000-93432200 Enhancers Primary T helper cells PMA-I stimulated --
37 chr1:93429200-93429600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:93429200-93430000 Enhancers GM12878-XiMat blood
39 chr1:93429200-93430200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:93429200-93431200 Weak transcription K562 blood
41 chr1:93429200-93432200 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr1:93429200-93438200 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015