Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs11020572	0.89[EUR][1000 genomes]
rs1553604	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1605288	0.83[AMR][1000 genomes]
rs1605289	0.83[AMR][1000 genomes]
rs1605291	0.83[AMR][1000 genomes]
rs1848076	0.83[AMR][1000 genomes]
rs1848078	0.82[AMR][1000 genomes]
rs1848079	0.83[AMR][1000 genomes]
rs3913857	0.83[AMR][1000 genomes]
rs4753506	0.83[AMR][1000 genomes]
rs4753507	0.82[AMR][1000 genomes]
rs4753511	0.82[AMR][1000 genomes]
rs4753512	0.89[EUR][1000 genomes]
rs584462	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs589024	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs608479	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs622372	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6483267	0.83[AMR][1000 genomes]
rs6483269	0.89[ASN][1000 genomes]
rs7108328	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7111123	0.83[AMR][1000 genomes]
rs7111268	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7111771	0.82[AMR][1000 genomes]
rs7112538	0.89[EUR][1000 genomes]
rs7127486	0.82[AMR][1000 genomes]
rs7130590	0.82[AMR][1000 genomes]
rs7130837	0.83[AMR][1000 genomes]
rs732358	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs732359	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7940081	0.83[AMR][1000 genomes]
rs7947606	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv898182	chr11:93381845-93637462	Strong transcription Genic enhancers Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93604200-93606600	Enhancers	Fetal Intestine Small	intestine
2	chr11:93606400-93607600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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