The 2.0 version of rSNPBase

Variant report

Variant rs10779413
Chromosome Location chr1:220807733-220807734
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220752600-220808600 Weak transcription Left Ventricle heart
2 chr1:220767800-220826400 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:220768000-220813800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:220778800-220837200 Weak transcription NHEK skin
5 chr1:220782800-220825800 Weak transcription Fetal Brain Male brain
6 chr1:220783200-220815000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:220784200-220836600 Weak transcription Fetal Lung lung
8 chr1:220784800-220815000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:220785000-220815400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:220785800-220808600 Weak transcription Brain Anterior Caudate brain
11 chr1:220791200-220828600 Weak transcription Right Ventricle heart
12 chr1:220791200-220841200 Weak transcription HMEC breast
13 chr1:220792000-220834200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:220796200-220827800 Weak transcription Gastric stomach
15 chr1:220798000-220836400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:220798800-220826200 Weak transcription Brain Angular Gyrus brain
17 chr1:220799600-220827000 Weak transcription Stomach Smooth Muscle stomach
18 chr1:220799800-220814600 Weak transcription Aorta Aorta
19 chr1:220800000-220808800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:220800000-220814800 Weak transcription Fetal Muscle Leg muscle
21 chr1:220800000-220837800 Weak transcription Esophagus oesophagus
22 chr1:220800200-220808600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:220800200-220814600 Weak transcription Fetal Stomach stomach
24 chr1:220800400-220811800 Weak transcription Fetal Muscle Trunk muscle
25 chr1:220800600-220808800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:220800800-220826400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:220801000-220808600 Weak transcription Brain Germinal Matrix brain
28 chr1:220801400-220809800 Weak transcription Fetal Brain Female brain
29 chr1:220801800-220808400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:220801800-220815200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr1:220802200-220814600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr1:220802400-220826400 Weak transcription H9 Cell Line embryonic stem cell
33 chr1:220803400-220808800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:220804600-220808400 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:220805000-220808600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr1:220805000-220815200 Weak transcription H1 Cell Line embryonic stem cell
37 chr1:220805000-220815200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:220805200-220810400 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr1:220805200-220814000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr1:220805200-220814000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:220805200-220814600 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr1:220805200-220827200 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:220805400-220810000 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr1:220806600-220814000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:220807000-220808600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr1:220807000-220815400 Weak transcription Adipose Nuclei Adipose
47 chr1:220807200-220808000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:220807200-220808800 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr1:220807400-220808200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:220807400-220816600 Strong transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015