The 2.0 version of rSNPBase

Variant report

Variant rs10783375
Chromosome Location chr12:50980504-50980505
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50962400-50983200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr12:50967200-50983000 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr12:50967400-50991200 Weak transcription Primary hematopoietic stem cells blood
4 chr12:50967400-50991200 Weak transcription Aorta Aorta
5 chr12:50968600-50983000 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr12:50968800-50982200 Weak transcription Fetal Brain Female brain
7 chr12:50968800-50989000 Weak transcription Fetal Intestine Small intestine
8 chr12:50968800-50997400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr12:50969000-50983200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr12:50969000-50983400 Weak transcription Rectal Smooth Muscle rectum
11 chr12:50969400-50983400 Weak transcription NHLF lung
12 chr12:50969600-50981000 Weak transcription Fetal Intestine Large intestine
13 chr12:50969600-50983400 Weak transcription HSMMtube muscle
14 chr12:50969600-50983600 Weak transcription Adipose Nuclei Adipose
15 chr12:50969600-50997400 Weak transcription Stomach Smooth Muscle stomach
16 chr12:50969800-50982000 Weak transcription Fetal Muscle Trunk muscle
17 chr12:50969800-50989600 Weak transcription Colon Smooth Muscle Colon
18 chr12:50973400-50983200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr12:50973800-50983200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr12:50973800-50983200 Weak transcription HUVEC blood vessel
21 chr12:50974000-50981000 Weak transcription Duodenum Mucosa Duodenum
22 chr12:50974000-50981000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr12:50974000-51011800 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr12:50974600-50984000 Weak transcription Psoas Muscle Psoas
25 chr12:50975600-50982200 Weak transcription Brain Germinal Matrix brain
26 chr12:50975600-50983200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr12:50975600-50983400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr12:50975600-50991200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr12:50975800-50983200 Weak transcription HMEC breast
30 chr12:50975800-50983400 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr12:50975800-50989400 Weak transcription HepG2 liver
32 chr12:50975800-50990200 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr12:50975800-50991400 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr12:50976000-50983200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr12:50976000-50983200 Weak transcription Osteobl bone
36 chr12:50976000-50983400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr12:50976000-50993400 Weak transcription Fetal Lung lung
38 chr12:50976200-50983200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr12:50976200-50991200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr12:50976600-50982200 Weak transcription Dnd41 blood
41 chr12:50976800-50983200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr12:50977000-50983400 Weak transcription Placenta Amnion Placenta Amnion
43 chr12:50977200-50980800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr12:50977200-50983400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr12:50977200-50983400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr12:50977400-50980800 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr12:50977400-50983200 Weak transcription Thymus Thymus
48 chr12:50977800-50989400 Weak transcription Brain Angular Gyrus brain
49 chr12:50977800-50990400 Weak transcription Left Ventricle heart
50 chr12:50978000-50991200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015