Variant report

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:76444677..76445883-chr11:76549434..76550433,4	K562	blood:
2	chr11:76444321..76446462-chr11:76517342..76520030,2	K562	blood:
3	chr11:76444616..76445153-chr11:76518177..76519095,2	MCF-7	breast:
4	chr11:76444662..76445640-chr11:76629853..76630608,2	MCF-7	breast:
5	chr11:76444642..76445671-chr11:76509955..76510846,7	K562	blood:
6	chr11:76444600..76445268-chr11:76549508..76550407,4	MCF-7	breast:
7	chr11:76444677..76445621-chr11:76756756..76757566,3	MCF-7	breast:
8	chr11:76443783..76447678-chr11:76493146..76497317,7	MCF-7	breast:
9	chr11:76444583..76446069-chr11:76756756..76757887,9	MCF-7	breast:
10	chr11:76443601..76445826-chr11:76571953..76574772,2	K562	blood:
11	chr11:76444256..76445576-chr11:76630135..76631218,4	K562	blood:
12	chr11:76432736..76434565-chr11:76442976..76445333,2	MCF-7	breast:

No data

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10899270	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899272	0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11236912	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11236916	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12718489	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4393347	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7109101	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7118639	0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7924970	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7925717	0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7935963	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7936177	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7938883	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7942580	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7949215	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7950053	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7951607	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7952109	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs948454	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs948455	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1810781	chr11:76311021-76464814	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	esv1850014	chr11:76384895-76464814	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv976471	chr11:76435262-76459660	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
4	nsv430404	chr11:76436952-76462852	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76433400-76456400	Weak transcription	Right Atrium	heart
2	chr11:76441200-76445200	Weak transcription	Fetal Intestine Small	intestine
3	chr11:76441400-76450200	Weak transcription	Liver	Liver
4	chr11:76441600-76445200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr11:76441600-76445600	Weak transcription	Fetal Intestine Large	intestine
6	chr11:76442800-76445000	Weak transcription	K562	blood

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