Variant report

Variant	rs10832793
Chromosome Location	chr11:17503850-17503851
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11024303	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11823850	0.92[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs3758947	0.83[ASN][1000 genomes]
rs3758948	0.83[ASN][1000 genomes]
rs4757523	0.83[ASN][1000 genomes]
rs66902740	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv469895	chr11:17368270-17584220	Weak transcription Bivalent Enhancer Genic enhancers Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17501600-17505800	Weak transcription	Fetal Intestine Small	intestine
2	chr11:17501600-17506200	Weak transcription	Fetal Intestine Large	intestine
3	chr11:17501600-17507600	Weak transcription	Gastric	stomach
4	chr11:17503600-17504000	Enhancers	Fetal Muscle Leg	muscle
5	chr11:17503800-17504000	Enhancers	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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