The 2.0 version of rSNPBase

Variant report

Variant rs10838563
Chromosome Location chr11:46124820-46124821
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46079000-46128200 Weak transcription Aorta Aorta
2 chr11:46094400-46128200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:46106400-46131800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr11:46111600-46130400 Weak transcription Fetal Stomach stomach
5 chr11:46112600-46130400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr11:46113600-46126600 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr11:46118800-46128200 Weak transcription Spleen Spleen
8 chr11:46119000-46126600 Weak transcription Lung lung
9 chr11:46119000-46126600 Weak transcription Pancreas Pancrea
10 chr11:46119000-46128200 Weak transcription Gastric stomach
11 chr11:46119000-46131200 Weak transcription Esophagus oesophagus
12 chr11:46121200-46126800 Weak transcription Fetal Brain Female brain
13 chr11:46121200-46127800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr11:46121200-46128200 Weak transcription Right Ventricle heart
15 chr11:46121400-46128200 Weak transcription HSMM muscle
16 chr11:46121800-46126600 Weak transcription NHEK skin
17 chr11:46121800-46126800 Weak transcription HUVEC blood vessel
18 chr11:46121800-46139200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr11:46122000-46126400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr11:46122000-46126600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr11:46122000-46126600 Weak transcription Muscle Satellite Cultured Cells --
22 chr11:46122000-46126600 Weak transcription Brain Germinal Matrix brain
23 chr11:46122000-46126600 Weak transcription Right Atrium heart
24 chr11:46122000-46127000 Weak transcription Brain Cingulate Gyrus brain
25 chr11:46122000-46127000 Weak transcription NH-A brain
26 chr11:46122000-46139600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr11:46122400-46126200 Weak transcription Psoas Muscle Psoas
28 chr11:46122400-46126600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr11:46122400-46126600 Weak transcription Fetal Thymus thymus
30 chr11:46122400-46126600 Weak transcription NHLF lung
31 chr11:46122400-46126800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr11:46122400-46129800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr11:46122600-46125800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr11:46122600-46125800 Weak transcription Ovary ovary
35 chr11:46122600-46126000 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr11:46122600-46126200 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr11:46122600-46126200 Weak transcription Adipose Nuclei Adipose
38 chr11:46122600-46126400 Weak transcription Osteobl bone
39 chr11:46122600-46126800 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr11:46122600-46126800 Weak transcription Small Intestine intestine
41 chr11:46122600-46127000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:46122600-46127600 Weak transcription Rectal Smooth Muscle rectum
43 chr11:46122600-46127800 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr11:46122600-46128000 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr11:46122600-46131200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr11:46122600-46135400 Weak transcription Primary B cells from cord blood blood
47 chr11:46122600-46140400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr11:46122600-46140400 Weak transcription Stomach Smooth Muscle stomach
49 chr11:46122800-46125800 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr11:46122800-46125800 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015