Variant report

Variant	rs10864142
Chromosome Location	chr1:215165561-215165562
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:215163670..215166597-chr1:215252249..215254651,2	MCF-7	breast:

rs_ID	r²[population]
rs11120458	1.00[ASN][1000 genomes]
rs11120459	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11120466	1.00[ASN][1000 genomes]
rs11802559	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11805210	1.00[ASN][1000 genomes]
rs12062933	1.00[ASN][1000 genomes]
rs12078174	1.00[ASN][1000 genomes]
rs12079236	1.00[ASN][1000 genomes]
rs12079267	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12084891	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12097900	0.83[CEU][hapmap]
rs12116663	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1377174	0.83[CEU][hapmap]
rs1377176	0.83[CEU][hapmap]
rs1452611	0.82[CEU][hapmap]
rs1452617	0.83[CEU][hapmap]
rs1452618	0.83[CEU][hapmap]
rs1452619	0.83[CEU][hapmap]
rs1452621	0.83[CEU][hapmap]
rs1452622	0.83[CEU][hapmap]
rs1452633	0.88[EUR][1000 genomes]
rs1452635	0.89[EUR][1000 genomes]
rs1562993	0.83[CEU][hapmap]
rs1562994	0.83[CEU][hapmap]
rs1901622	0.83[CEU][hapmap]
rs2601629	0.90[CEU][hapmap]
rs2601631	0.83[CEU][hapmap]
rs2601632	0.83[CEU][hapmap]
rs2802652	0.83[CEU][hapmap]
rs2802653	0.83[CEU][hapmap]
rs2802655	0.83[CEU][hapmap]
rs2841578	0.83[CEU][hapmap]
rs2841586	0.83[CEU][hapmap]
rs2841589	0.83[CEU][hapmap]
rs2841590	0.83[CEU][hapmap]
rs2841617	0.89[EUR][1000 genomes]
rs56069026	1.00[ASN][1000 genomes]
rs61255106	1.00[ASN][1000 genomes]
rs6662428	0.87[EUR][1000 genomes]
rs6679757	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72760669	1.00[ASN][1000 genomes]
rs72762605	1.00[ASN][1000 genomes]
rs896653	0.80[EUR][1000 genomes]

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215163800-215166800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr1:215163800-215168200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr1:215164000-215166800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:215164200-215166800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr1:215164200-215166800	Weak transcription	NHLF	lung
6	chr1:215164200-215167800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr1:215164200-215174800	Weak transcription	NH-A	brain
8	chr1:215164400-215166600	Weak transcription	NHEK	skin
9	chr1:215164800-215166800	Weak transcription	HMEC	breast
10	chr1:215164800-215166800	Weak transcription	Osteobl	bone
11	chr1:215164800-215167000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr1:215164800-215175000	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr1:215165200-215166600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr1:215165200-215166600	Weak transcription	NHDF-Ad	bronchial
15	chr1:215165200-215166800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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