Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10782610	0.99[ASN][1000 genomes]
rs10782611	0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10873875	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs10873876	0.94[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs1414480	0.83[EUR][1000 genomes]
rs1414483	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1414484	0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1414485	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1537784	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1570823	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17098538	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2065794	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2392037	0.82[CHB][hapmap]
rs2893416	0.89[YRI][hapmap]
rs34995712	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs36115631	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3851267	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs3903914	0.82[CHB][hapmap];0.83[ASN][1000 genomes]
rs3904687	0.95[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4511169	0.93[AFR][1000 genomes]
rs6701166	0.82[CHB][hapmap];0.80[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs9437129	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9437407	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870621	chr1:76620313-76997071	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv534168	chr1:76718950-77039352	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:76755800-76783000	Weak transcription	Fetal Lung	lung
2	chr1:76760400-76779200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:76765200-76775400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:76768600-76775400	Weak transcription	Fetal Thymus	thymus

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