Variant report

Variant	rs10903332
Chromosome Location	chr8:10771222-10771223
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:10770919..10772954-chr8:10785860..10787582,2	K562	blood:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10903333	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11776011	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11776368	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11986699	0.80[ASN][1000 genomes]
rs11990550	0.86[ASN][1000 genomes]
rs11993591	0.80[ASN][1000 genomes]
rs1529598	0.83[EUR][1000 genomes]
rs34497451	0.86[ASN][1000 genomes]
rs35888807	0.81[EUR][1000 genomes]
rs4256557	0.80[ASN][1000 genomes]
rs4496928	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4520127	0.86[ASN][1000 genomes]
rs4554431	0.93[ASN][1000 genomes]
rs4841458	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4841461	0.80[ASN][1000 genomes]
rs57145255	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6985767	0.83[EUR][1000 genomes]
rs6992103	0.93[ASN][1000 genomes]
rs7015168	0.93[ASN][1000 genomes]
rs7814762	0.80[ASN][1000 genomes]
rs7837038	0.93[ASN][1000 genomes]
rs7843470	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv917085	chr8:10237508-10828204	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv1017836	chr8:10591801-10803617	Enhancers ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
3	nsv1034988	chr8:10591801-10804243	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
4	nsv831232	chr8:10606053-10774948	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	12 gene(s)	inside rSNPs	diseases
5	nsv1025190	chr8:10756331-10802566	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Strong transcription	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
6	esv3406989	chr8:10767892-10771540	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:10762400-10778800	Weak transcription	Brain Angular Gyrus	brain
2	chr8:10765800-10778400	Weak transcription	Pancreas	Pancrea
3	chr8:10768600-10771400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:10770800-10771600	Enhancers	Placenta	Placenta
5	chr8:10770800-10772600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr8:10771000-10771800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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