The 2.0 version of rSNPBase

Variant report

Variant rs10908485
Chromosome Location chr1:155902725-155902726
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155882200-155903000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr1:155896600-155903200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:155896800-155903200 Weak transcription Gastric stomach
4 chr1:155897400-155903400 Weak transcription Aorta Aorta
5 chr1:155897800-155904000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:155898600-155903000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
7 chr1:155899000-155903000 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr1:155899200-155902800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
9 chr1:155899400-155902800 Genic enhancers Fetal Intestine Large intestine
10 chr1:155899400-155903200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
11 chr1:155899400-155903600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:155899800-155903000 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
13 chr1:155899800-155903200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:155899800-155903200 Genic enhancers Primary T cells fromperipheralblood blood
15 chr1:155900000-155902800 Genic enhancers Primary T cells from cord blood blood
16 chr1:155900000-155903000 Genic enhancers Primary T helper naive cells from peripheral blood blood
17 chr1:155900000-155903000 Genic enhancers Liver Liver
18 chr1:155900000-155903200 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:155900000-155903200 Genic enhancers Primary T helper cells fromperipheralblood blood
20 chr1:155900000-155903400 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:155900000-155903600 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:155900000-155903600 Transcr. at gene 5' and 3' GM12878-XiMat blood
23 chr1:155900200-155902800 Genic enhancers Primary T killer memory cells from peripheral blood blood
24 chr1:155900200-155902800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:155900200-155903000 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:155900200-155903000 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:155900200-155903000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
28 chr1:155900200-155903000 Genic enhancers Brain Anterior Caudate brain
29 chr1:155900200-155903200 Genic enhancers Primary B cells from peripheral blood blood
30 chr1:155900200-155903400 Genic enhancers Fetal Lung lung
31 chr1:155900200-155903400 Transcr. at gene 5' and 3' HMEC breast
32 chr1:155900200-155903600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:155900200-155903600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:155900400-155903000 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
35 chr1:155900400-155903000 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
36 chr1:155900400-155903400 Enhancers Fetal Heart heart
37 chr1:155900600-155902800 Genic enhancers Sigmoid Colon Sigmoid Colon
38 chr1:155900600-155903000 Genic enhancers Fetal Thymus thymus
39 chr1:155900600-155903200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:155900600-155903200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr1:155900600-155903200 Genic enhancers Cortex derived primary cultured neurospheres brain
42 chr1:155900600-155903200 Genic enhancers Fetal Muscle Trunk muscle
43 chr1:155900600-155903200 Genic enhancers Fetal Muscle Leg muscle
44 chr1:155900600-155903200 Genic enhancers Placenta Placenta
45 chr1:155900600-155903200 Genic enhancers Fetal Stomach stomach
46 chr1:155900600-155903800 Transcr. at gene 5' and 3' NHLF lung
47 chr1:155900800-155903000 Genic enhancers Fetal Intestine Small intestine
48 chr1:155901000-155902800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:155901000-155903000 Transcr. at gene 5' and 3' Hela-S3 cervix
50 chr1:155901000-155903200 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015