Variant report
Variant | rs10915733 |
---|---|
Chromosome Location | chr1:225047216-225047217 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:4 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:225044560..225047473-chr1:225049802..225052064,2 | K562 | blood: | |
2 | chr1:225046184..225050488-chr1:225056479..225059457,3 | K562 | blood: | |
3 | chr1:224688139..224690298-chr1:225044581..225047366,2 | K562 | blood: | |
4 | chr1:225038859..225040446-chr1:225045344..225047450,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10399941 | 0.81[ASN][1000 genomes] |
rs10495231 | 0.81[ASN][1000 genomes] |
rs10799282 | 0.96[ASN][1000 genomes] |
rs10799283 | 0.96[ASN][1000 genomes] |
rs10915743 | 0.96[ASN][1000 genomes] |
rs10915744 | 0.96[ASN][1000 genomes] |
rs10915745 | 0.96[ASN][1000 genomes] |
rs10915747 | 0.89[ASN][1000 genomes] |
rs10915748 | 0.89[ASN][1000 genomes] |
rs10915749 | 0.89[ASN][1000 genomes] |
rs10915750 | 0.89[ASN][1000 genomes] |
rs10915751 | 0.89[ASN][1000 genomes] |
rs10915757 | 0.89[ASN][1000 genomes] |
rs10915758 | 0.89[ASN][1000 genomes] |
rs10915761 | 0.81[ASN][1000 genomes] |
rs10915762 | 0.81[ASN][1000 genomes] |
rs10915763 | 0.81[ASN][1000 genomes] |
rs11487461 | 0.96[ASN][1000 genomes] |
rs12060676 | 0.96[ASN][1000 genomes] |
rs12061172 | 0.81[ASN][1000 genomes] |
rs12061874 | 0.82[ASN][1000 genomes] |
rs12068731 | 0.96[ASN][1000 genomes] |
rs12068939 | 1.00[CHB][hapmap];1.00[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs12069537 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
rs12071453 | 0.89[ASN][1000 genomes] |
rs12072713 | 0.89[ASN][1000 genomes] |
rs12073050 | 0.96[ASN][1000 genomes] |
rs12074130 | 0.89[ASN][1000 genomes] |
rs12077191 | 1.00[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs12082397 | 0.89[ASN][1000 genomes] |
rs12086122 | 0.89[ASN][1000 genomes] |
rs12086373 | 0.89[ASN][1000 genomes] |
rs12088836 | 0.81[ASN][1000 genomes] |
rs12090519 | 0.96[ASN][1000 genomes] |
rs12093086 | 0.89[ASN][1000 genomes] |
rs12093545 | 0.89[ASN][1000 genomes] |
rs12095812 | 0.89[ASN][1000 genomes] |
rs12095841 | 0.96[ASN][1000 genomes] |
rs12097532 | 0.96[ASN][1000 genomes] |
rs12097577 | 0.96[ASN][1000 genomes] |
rs1482278 | 0.96[ASN][1000 genomes] |
rs16858094 | 0.96[ASN][1000 genomes] |
rs16858965 | 0.89[ASN][1000 genomes] |
rs2244108 | 0.96[ASN][1000 genomes] |
rs2244109 | 0.96[ASN][1000 genomes] |
rs2244198 | 0.96[ASN][1000 genomes] |
rs2254430 | 0.96[ASN][1000 genomes] |
rs2406099 | 0.96[ASN][1000 genomes] |
rs2449279 | 0.81[ASN][1000 genomes] |
rs2449305 | 0.81[ASN][1000 genomes] |
rs2449306 | 0.81[ASN][1000 genomes] |
rs2456344 | 0.81[ASN][1000 genomes] |
rs2456350 | 0.81[ASN][1000 genomes] |
rs2456354 | 0.81[ASN][1000 genomes] |
rs2501103 | 0.81[ASN][1000 genomes] |
rs2662910 | 0.96[ASN][1000 genomes] |
rs2662911 | 0.96[ASN][1000 genomes] |
rs2662913 | 0.96[ASN][1000 genomes] |
rs2802546 | 0.96[ASN][1000 genomes] |
rs2802547 | 0.83[ASN][1000 genomes] |
rs2802567 | 0.96[ASN][1000 genomes] |
rs2802736 | 0.96[ASN][1000 genomes] |
rs28510743 | 0.96[ASN][1000 genomes] |
rs28673436 | 0.96[ASN][1000 genomes] |
rs4256778 | 0.96[ASN][1000 genomes] |
rs55708629 | 0.81[ASN][1000 genomes] |
rs56302122 | 0.81[ASN][1000 genomes] |
rs59318794 | 0.96[ASN][1000 genomes] |
rs60619295 | 0.96[ASN][1000 genomes] |
rs6662177 | 0.81[ASN][1000 genomes] |
rs6680233 | 0.81[ASN][1000 genomes] |
rs6689287 | 0.81[ASN][1000 genomes] |
rs6694400 | 0.96[ASN][1000 genomes] |
rs6700281 | 0.89[ASN][1000 genomes] |
rs74146611 | 0.81[ASN][1000 genomes] |
rs74149417 | 0.96[ASN][1000 genomes] |
rs74149420 | 0.96[ASN][1000 genomes] |
rs74149426 | 0.89[ASN][1000 genomes] |
rs74149428 | 0.89[ASN][1000 genomes] |
rs74149429 | 0.85[ASN][1000 genomes] |
rs74149436 | 0.81[ASN][1000 genomes] |
rs7527885 | 0.89[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv527809 | chr1:225045828-225048747 | Enhancers Weak transcription | Chromatin interactive region | n/a | inside rSNPs | n/a |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:225044000-225049200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
2 | chr1:225047200-225047600 | Enhancers | HMEC | breast |
3 | chr1:225047200-225048200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |