The 2.0 version of rSNPBase

Variant report

Variant rs10915820
Chromosome Location chr1:225584811-225584812
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225567000-225585000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:225567200-225585000 Weak transcription NHEK skin
3 chr1:225568200-225585000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:225568200-225595800 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr1:225569400-225585000 Weak transcription Pancreas Pancrea
6 chr1:225570400-225587600 Weak transcription Spleen Spleen
7 chr1:225570800-225600000 Weak transcription HSMMtube muscle
8 chr1:225571400-225585000 Weak transcription Gastric stomach
9 chr1:225575600-225588200 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr1:225576200-225585000 Weak transcription Fetal Stomach stomach
11 chr1:225576200-225585200 Weak transcription Osteobl bone
12 chr1:225576200-225594400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:225576400-225585000 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:225576400-225586000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:225576400-225586000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:225576600-225588600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:225576800-225585000 Weak transcription Lung lung
18 chr1:225577800-225585000 Weak transcription Esophagus oesophagus
19 chr1:225577800-225585200 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr1:225578000-225585000 Weak transcription Adipose Nuclei Adipose
21 chr1:225578000-225588600 Weak transcription Fetal Kidney kidney
22 chr1:225578000-225597800 Weak transcription Brain Cingulate Gyrus brain
23 chr1:225578000-225599200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr1:225578400-225588200 Weak transcription Right Ventricle heart
25 chr1:225578600-225588200 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:225579800-225585000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:225580800-225585000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:225580800-225599200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:225581000-225585000 Weak transcription Left Ventricle heart
30 chr1:225581000-225585200 Weak transcription Liver Liver
31 chr1:225581200-225585000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:225581400-225592600 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr1:225581600-225596200 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr1:225581800-225585000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:225581800-225585000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:225581800-225585800 Weak transcription Primary T cells fromperipheralblood blood
37 chr1:225581800-225590800 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:225582000-225585000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:225582000-225585000 Weak transcription Brain Germinal Matrix brain
40 chr1:225582000-225585200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:225582000-225585200 Weak transcription Fetal Muscle Trunk muscle
42 chr1:225582000-225585200 Weak transcription Fetal Muscle Leg muscle
43 chr1:225582000-225585800 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr1:225582000-225586000 Weak transcription Ovary ovary
45 chr1:225582000-225587800 Weak transcription GM12878-XiMat blood
46 chr1:225582000-225597800 Weak transcription Brain Anterior Caudate brain
47 chr1:225582200-225585000 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr1:225582200-225588000 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr1:225582200-225588200 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr1:225582200-225588200 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015