The 2.0 version of rSNPBase

Variant report

Variant rs10939901
Chromosome Location chr5:60696425-60696426
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60659000-60703800 Weak transcription Primary B cells from cord blood blood
2 chr5:60659400-60703600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr5:60659600-60697600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr5:60681200-60704000 Weak transcription Brain Germinal Matrix brain
5 chr5:60682000-60709800 Weak transcription Left Ventricle heart
6 chr5:60682400-60697800 Weak transcription Fetal Kidney kidney
7 chr5:60682400-60698800 Weak transcription Small Intestine intestine
8 chr5:60682600-60703600 Weak transcription Rectal Smooth Muscle rectum
9 chr5:60682600-60704200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr5:60682600-60712400 Weak transcription Esophagus oesophagus
11 chr5:60683000-60696800 Weak transcription HSMMtube muscle
12 chr5:60684600-60696800 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr5:60685400-60704000 Weak transcription Primary B cells from peripheral blood blood
14 chr5:60686400-60697600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr5:60687400-60703600 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr5:60687400-60705800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:60687600-60697000 Weak transcription Primary monocytes fromperipheralblood blood
18 chr5:60687600-60697000 Weak transcription HSMM muscle
19 chr5:60687600-60697600 Weak transcription Fetal Brain Female brain
20 chr5:60687600-60697600 Weak transcription Fetal Lung lung
21 chr5:60687600-60704400 Weak transcription Ovary ovary
22 chr5:60687600-60711800 Weak transcription Aorta Aorta
23 chr5:60687800-60698600 Weak transcription Primary hematopoietic stem cells blood
24 chr5:60687800-60699400 Weak transcription Fetal Stomach stomach
25 chr5:60687800-60703800 Weak transcription Stomach Smooth Muscle stomach
26 chr5:60687800-60704200 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr5:60688000-60696800 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr5:60688000-60697200 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr5:60690200-60697400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr5:60690200-60697600 Weak transcription Right Atrium heart
31 chr5:60690400-60697600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr5:60690400-60703600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr5:60690800-60698800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr5:60690800-60704400 Weak transcription Psoas Muscle Psoas
35 chr5:60690800-60705800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr5:60690800-60706800 Weak transcription Gastric stomach
37 chr5:60691000-60704400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr5:60691200-60697000 Weak transcription Pancreas Pancrea
39 chr5:60692800-60697600 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr5:60693200-60702000 Enhancers Brain Hippocampus Middle brain
41 chr5:60693400-60696600 Weak transcription HUVEC blood vessel
42 chr5:60693400-60697000 Weak transcription NH-A brain
43 chr5:60693400-60697200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr5:60693400-60697400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr5:60693400-60697600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr5:60693400-60697600 Weak transcription NHDF-Ad bronchial
47 chr5:60693400-60697800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr5:60693800-60697200 Weak transcription Muscle Satellite Cultured Cells --
49 chr5:60693800-60697800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr5:60693800-60698800 Weak transcription Adipose Nuclei Adipose

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015