Variant report

Variant rs10975162
Chromosome Location chr9:562441-562442
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:546600-569400 Weak transcription Esophagus oesophagus
2 chr9:547600-571200 Weak transcription Aorta Aorta
3 chr9:547800-563000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr9:549800-569000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr9:549800-593800 Weak transcription Lung lung
6 chr9:550800-562600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr9:552400-565400 Weak transcription Fetal Muscle Leg muscle
8 chr9:552400-574000 Weak transcription Right Ventricle heart
9 chr9:553200-564800 Weak transcription Fetal Muscle Trunk muscle
10 chr9:555000-568400 Weak transcription Pancreas Pancrea
11 chr9:555400-568400 Weak transcription Left Ventricle heart
12 chr9:556400-564400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr9:556800-567200 Weak transcription Duodenum Mucosa Duodenum
14 chr9:556800-567400 Weak transcription Stomach Mucosa stomach
15 chr9:557800-564600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr9:558000-565600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr9:558800-563000 Enhancers A549 lung
18 chr9:559000-571000 Weak transcription Psoas Muscle Psoas
19 chr9:559000-573600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr9:559600-563800 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr9:559800-562800 Enhancers Brain Hippocampus Middle brain
22 chr9:560000-563400 Enhancers Brain Angular Gyrus brain
23 chr9:560400-563400 Enhancers Fetal Heart heart
24 chr9:560400-563600 Enhancers Brain Cingulate Gyrus brain
25 chr9:560400-563800 Enhancers Cortex derived primary cultured neurospheres brain
26 chr9:560800-563400 Enhancers Brain Anterior Caudate brain
27 chr9:560800-563400 Enhancers Brain Inferior Temporal Lobe brain
28 chr9:561000-562600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr9:561200-562800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr9:561200-563200 Weak transcription Fetal Kidney kidney
31 chr9:561200-565400 Weak transcription NHEK skin
32 chr9:561600-565200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr9:561800-564600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr9:561800-570000 Weak transcription Fetal Lung lung
35 chr9:562000-565200 Weak transcription HMEC breast
36 chr9:562200-563200 Weak transcription Colonic Mucosa Colon
37 chr9:562200-563800 Enhancers Fetal Intestine Large intestine
38 chr9:562400-562600 Enhancers Fetal Intestine Small intestine
39 chr9:562400-562600 Enhancers Right Atrium heart
40 chr9:562400-563000 Enhancers Brain Substantia Nigra brain
41 chr9:562400-563000 Active TSS Sigmoid Colon Sigmoid Colon

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