Variant report

Variant rs10975577
Chromosome Location chr9:649342-649343
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:616800-655800 Weak transcription Pancreas Pancrea
2 chr9:628800-649400 Weak transcription Duodenum Mucosa Duodenum
3 chr9:635000-650400 Weak transcription Fetal Intestine Small intestine
4 chr9:635200-649800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr9:635400-649400 Weak transcription Right Atrium heart
6 chr9:635600-649600 Weak transcription Left Ventricle heart
7 chr9:638600-649600 Weak transcription Right Ventricle heart
8 chr9:643200-650400 Weak transcription HSMMtube muscle
9 chr9:646400-652800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr9:647000-649400 Enhancers Fetal Heart heart
11 chr9:647200-649400 Weak transcription Aorta Aorta
12 chr9:648200-649600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr9:648200-651600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr9:648400-649800 Enhancers HUES64 Cell Line embryonic stem cell
15 chr9:648600-649400 Enhancers NHEK skin
16 chr9:648600-649600 Enhancers HUES6 Cell Line embryonic stem cell
17 chr9:648600-650000 Enhancers Cortex derived primary cultured neurospheres brain
18 chr9:648600-650800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr9:648600-650800 Enhancers Esophagus oesophagus
20 chr9:648600-651600 Enhancers ES-I3 Cell Line embryonic stem cell
21 chr9:648600-651600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr9:648600-651600 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr9:648600-651800 Enhancers H1 Cell Line embryonic stem cell
24 chr9:648800-649400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr9:648800-649600 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr9:648800-649600 Weak transcription Psoas Muscle Psoas
27 chr9:648800-649800 Weak transcription Fetal Thymus thymus
28 chr9:648800-650000 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr9:648800-650400 Enhancers Brain Hippocampus Middle brain
30 chr9:648800-650600 Enhancers Skeletal Muscle Male skeletal muscle
31 chr9:648800-650800 Enhancers Rectal Smooth Muscle rectum
32 chr9:648800-650800 Enhancers HMEC breast
33 chr9:648800-651200 Enhancers Primary B cells from peripheral blood blood
34 chr9:648800-651800 Enhancers Brain Anterior Caudate brain
35 chr9:649000-649600 Enhancers iPS-20b Cell Line embryonic stem cell
36 chr9:649000-649600 Enhancers Stomach Smooth Muscle stomach
37 chr9:649000-649800 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr9:649000-649800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr9:649000-650000 Enhancers HUES48 Cell Line embryonic stem cell
40 chr9:649000-650200 Enhancers Primary T helper cells fromperipheralblood blood
41 chr9:649000-650400 Enhancers Fetal Kidney kidney
42 chr9:649000-650600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr9:649000-651800 Enhancers Brain Cingulate Gyrus brain
44 chr9:649000-651800 Enhancers Brain Substantia Nigra brain
45 chr9:649200-649600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
46 chr9:649200-649800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
47 chr9:649200-650000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr9:649200-650200 Enhancers Primary B cells from cord blood blood
49 chr9:649200-650400 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr9:649200-650400 Flanking Active TSS Colon Smooth Muscle Colon

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