Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:116630964..116633382-chr9:116635893..116638560,3	K562	blood:
2	chr9:116612441..116615923-chr9:116636508..116640931,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000232905	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10817521	0.83[AMR][1000 genomes]
rs10817523	0.86[AMR][1000 genomes]
rs10981930	0.83[AMR][1000 genomes]
rs10981945	0.86[AMR][1000 genomes]
rs10981979	0.80[AFR][1000 genomes]
rs10981982	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10981983	0.86[AMR][1000 genomes]
rs10981988	0.81[AMR][1000 genomes]
rs12551439	0.89[AMR][1000 genomes]
rs1536967	0.86[AMR][1000 genomes]
rs1590887	0.86[AMR][1000 genomes]
rs16909454	0.82[AMR][1000 genomes]
rs16910261	0.91[AMR][1000 genomes]
rs35929232	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs4978557	0.82[ASN][1000 genomes]
rs56730168	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs57848797	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs60668360	0.95[ASN][1000 genomes]
rs61533724	0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7032965	0.86[AMR][1000 genomes]
rs7852347	0.90[ASN][1000 genomes]
rs9777523	0.86[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430093	chr9:116330446-117325446	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116634400-116637800	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr9:116635400-116637800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
3	chr9:116635400-116637800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr9:116635800-116637600	Weak transcription	NHEK	skin
5	chr9:116636000-116637600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr9:116636000-116637800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr9:116636000-116638000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr9:116636200-116637600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr9:116636400-116636800	Enhancers	H1 Cell Line	embryonic stem cell
10	chr9:116636600-116637800	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr9:116636600-116637800	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr9:116636600-116638000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr9:116636600-116638000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr9:116636600-116638000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr9:116636600-116638000	Weak transcription	HMEC	breast

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