Variant report

Variant	rs10995232
Chromosome Location	chr10:52740517-52740518
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1015288	0.80[ASN][1000 genomes]
rs10761651	0.80[ASN][1000 genomes]
rs10761657	0.80[ASN][1000 genomes]
rs10822032	0.84[EUR][1000 genomes]
rs10822040	0.80[ASN][1000 genomes]
rs10822045	0.80[ASN][1000 genomes]
rs4041333	0.80[ASN][1000 genomes]
rs6479833	0.80[ASN][1000 genomes]
rs6479834	0.80[ASN][1000 genomes]
rs6479835	0.80[ASN][1000 genomes]
rs6479836	0.80[ASN][1000 genomes]
rs7076050	0.80[EUR][1000 genomes]
rs7091997	0.84[EUR][1000 genomes]
rs7099130	0.80[ASN][1000 genomes]
rs7900993	0.80[ASN][1000 genomes]
rs7916612	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831872	chr10:52663328-52818537	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv831873	chr10:52710610-52899540	Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv1510385	chr10:52740514-52740518	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:52738400-52748600	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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