Variant report

Variant	rs11006727
Chromosome Location	chr10:19032354-19032355
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10763624	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10764729	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10829276	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10829278	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11015839	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11015860	0.97[EUR][1000 genomes]
rs12245924	0.97[EUR][1000 genomes]
rs1907042	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2358186	0.95[EUR][1000 genomes]
rs4576719	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4748513	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72775137	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7894191	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7921519	0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894915	chr10:18984571-19257664	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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