Variant report

Variant	rs11024210
Chromosome Location	chr11:17265717-17265718
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:17263778..17266098-chr11:17373764..17376124,2	K562	blood:

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10437606	0.91[AFR][1000 genomes]
rs10466383	1.00[YRI][hapmap]
rs10466420	1.00[YRI][hapmap]
rs11024191	0.91[AFR][1000 genomes]
rs11024200	0.91[AFR][1000 genomes]
rs11024205	1.00[AFR][1000 genomes]
rs11024209	1.00[AFR][1000 genomes]
rs11024214	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs11024224	1.00[AFR][1000 genomes]
rs11024225	1.00[AFR][1000 genomes]
rs11024237	1.00[YRI][hapmap]
rs12270107	0.91[AFR][1000 genomes]
rs12270787	0.91[AFR][1000 genomes]
rs12271185	1.00[AFR][1000 genomes]
rs12271462	1.00[AFR][1000 genomes]
rs12272752	1.00[YRI][hapmap]
rs12273822	0.91[AFR][1000 genomes]
rs12274808	0.91[AFR][1000 genomes]
rs12275868	1.00[AFR][1000 genomes]
rs12277497	0.91[AFR][1000 genomes]
rs12277622	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12280196	1.00[AFR][1000 genomes]
rs12281046	0.91[AFR][1000 genomes]
rs12282134	1.00[AFR][1000 genomes]
rs12283197	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12284302	1.00[AFR][1000 genomes]
rs12284418	1.00[AFR][1000 genomes]
rs12284697	0.91[AFR][1000 genomes]
rs12286496	0.91[AFR][1000 genomes]
rs12287981	0.91[AFR][1000 genomes]
rs12288071	0.91[AFR][1000 genomes]
rs12288105	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12289626	1.00[AFR][1000 genomes]
rs12289628	1.00[AFR][1000 genomes]
rs12290259	0.91[AFR][1000 genomes]
rs12290804	0.91[AFR][1000 genomes]
rs12291395	1.00[MKK][hapmap];1.00[YRI][hapmap]
rs12291427	0.91[AFR][1000 genomes]
rs12291561	0.91[AFR][1000 genomes]
rs12292310	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12292965	1.00[YRI][hapmap]
rs12293230	0.82[AFR][1000 genomes]
rs12293793	1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs12293863	1.00[AFR][1000 genomes]
rs12293938	1.00[AFR][1000 genomes]
rs12294645	0.91[AFR][1000 genomes]
rs12295187	0.82[AFR][1000 genomes]
rs12295410	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467711	chr11:17027555-17320797	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv553568	chr11:17027555-17320797	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv469762	chr11:17170690-17320691	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
4	nsv482905	chr11:17170690-17320691	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17265000-17267200	Enhancers	Dnd41	blood
2	chr11:17265200-17266600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr11:17265200-17266600	Enhancers	GM12878-XiMat	blood
4	chr11:17265200-17267000	Enhancers	Primary hematopoietic stem cells	blood
5	chr11:17265200-17267000	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr11:17265600-17266600	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr11:17265600-17267000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr11:17265600-17267200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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