Variant report

(count:7 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	IRF1	chr11:17280247-17280626	K562	blood:	n/a	n/a
2	ARID3A	chr11:17279960-17280656	K562	blood:	n/a	n/a
3	EP300	chr11:17280203-17280604	K562	blood:	n/a	n/a
4	RCOR1	chr11:17280245-17280618	K562	blood:	n/a	n/a
5	TAL1	chr11:17280211-17280594	K562	blood:	n/a	n/a
6	TEAD4	chr11:17280132-17280631	K562	blood:	n/a	n/a
7	GATA1	chr11:17280143-17280598	PBDE	blood:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:17278678..17280712-chr11:17283886..17286306,2	K562	blood:
2	chr11:17276902..17279261-chr11:17279604..17281506,2	K562	blood:
3	chr11:17229468..17231636-chr11:17279187..17282001,2	MCF-7	breast:

No data

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10430892	1.00[EUR][1000 genomes]
rs10832749	0.87[ASN][1000 genomes]
rs10832753	0.89[ASN][1000 genomes]
rs10832754	0.88[ASN][1000 genomes]
rs11024185	1.00[EUR][1000 genomes]
rs11024186	1.00[EUR][1000 genomes]
rs11024190	1.00[EUR][1000 genomes]
rs11024197	1.00[EUR][1000 genomes]
rs11024199	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11024201	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11024215	0.91[ASN][1000 genomes]
rs11024218	0.91[ASN][1000 genomes]
rs11024243	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11024245	1.00[EUR][1000 genomes]
rs11024246	1.00[EUR][1000 genomes]
rs12225195	1.00[EUR][1000 genomes]
rs12576590	1.00[EUR][1000 genomes]
rs2302511	1.00[EUR][1000 genomes]
rs4757499	1.00[EUR][1000 genomes]
rs61555995	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6416174	1.00[EUR][1000 genomes]
rs6486350	1.00[EUR][1000 genomes]
rs6486353	1.00[EUR][1000 genomes]
rs67771121	1.00[EUR][1000 genomes]
rs68175505	0.92[ASN][1000 genomes]
rs7101938	0.86[ASN][1000 genomes]
rs7111505	0.88[ASN][1000 genomes]
rs7113011	1.00[EUR][1000 genomes]
rs7122571	1.00[EUR][1000 genomes]
rs7127347	0.81[ASN][1000 genomes]
rs72632985	1.00[AFR][1000 genomes]
rs72632988	1.00[EUR][1000 genomes]
rs72632989	1.00[EUR][1000 genomes]
rs72632990	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7934596	1.00[EUR][1000 genomes]
rs7945756	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467711	chr11:17027555-17320797	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv553568	chr11:17027555-17320797	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv469762	chr11:17170690-17320691	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
4	nsv482905	chr11:17170690-17320691	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17278600-17280600	Enhancers	Stomach Mucosa	stomach
2	chr11:17278800-17281000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr11:17278800-17288800	Weak transcription	Placenta	Placenta
4	chr11:17279000-17281000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr11:17279000-17281000	Weak transcription	NHEK	skin
6	chr11:17279000-17281200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr11:17279000-17284600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr11:17279000-17284600	Weak transcription	NHLF	lung
9	chr11:17279000-17284800	Weak transcription	HMEC	breast
10	chr11:17279200-17284600	Weak transcription	Osteobl	bone
11	chr11:17279600-17280600	Enhancers	HepG2	liver
12	chr11:17279800-17284400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr11:17279800-17285000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr11:17280000-17285200	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr11:17280000-17285200	Weak transcription	Hela-S3	cervix
16	chr11:17280200-17280600	Flanking Active TSS	K562	blood
17	chr11:17280400-17284600	Weak transcription	A549	lung

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