Variant report

Variant	rs11031820
Chromosome Location	chr11:32516917-32516918
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10767941	0.81[ASN][1000 genomes]
rs10767942	0.85[ASN][1000 genomes]
rs10835928	0.80[ASN][1000 genomes]
rs10835930	0.87[ASN][1000 genomes]
rs10835931	0.87[ASN][1000 genomes]
rs11031822	0.85[ASN][1000 genomes]
rs11031830	0.85[ASN][1000 genomes]
rs3890511	0.85[ASN][1000 genomes]
rs60599105	0.86[ASN][1000 genomes]
rs6484580	0.82[ASN][1000 genomes]
rs6484581	0.82[ASN][1000 genomes]
rs7103780	0.81[ASN][1000 genomes]
rs7129461	0.81[ASN][1000 genomes]
rs7130245	0.85[ASN][1000 genomes]
rs7483925	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32516400-32517400	Enhancers	Ovary	ovary
2	chr11:32516400-32518000	Enhancers	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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