Variant report

Variant	rs11032672
Chromosome Location	chr11:34433818-34433819
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:34430741..34432789-chr11:34432897..34434537,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11032656	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11032702	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs1107573	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12269988	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12272630	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs12273124	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs12285026	0.94[EUR][1000 genomes]
rs12285064	0.94[EUR][1000 genomes]
rs12288793	0.94[EUR][1000 genomes]
rs12293745	0.85[CEU][hapmap];0.92[EUR][1000 genomes]
rs12295136	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs16925514	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17883208	0.88[EUR][1000 genomes]
rs17884086	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs57360584	0.94[EUR][1000 genomes]
rs58817388	0.97[EUR][1000 genomes]
rs59468184	0.97[EUR][1000 genomes]
rs7114869	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs7121907	0.94[EUR][1000 genomes]
rs7125892	0.85[CEU][hapmap];0.92[EUR][1000 genomes]
rs73436768	0.94[EUR][1000 genomes]
rs7926613	0.87[EUR][1000 genomes]
rs9282626	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897205	chr11:34248229-34507213	Enhancers Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv897207	chr11:34253683-34621004	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
3	nsv897208	chr11:34257064-34562247	Strong transcription Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
4	nsv897209	chr11:34309519-34548906	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
5	nsv983151	chr11:34401342-34444667	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv832114	chr11:34424428-34607851	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34425600-34435400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:34427600-34434400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr11:34429000-34434800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr11:34433800-34436400	Weak transcription	Hela-S3	cervix

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