The 2.0 version of rSNPBase

Variant report

Variant rs11039033
Chromosome Location chr11:46965526-46965527
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46958600-46973800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr11:46958800-46969400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr11:46959000-46966200 Weak transcription Placenta Placenta
4 chr11:46959000-46966800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr11:46959000-46968000 Weak transcription Spleen Spleen
6 chr11:46959000-46968800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr11:46959000-46969000 Weak transcription Brain Substantia Nigra brain
8 chr11:46959000-46969200 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr11:46959000-46969400 Weak transcription Colonic Mucosa Colon
10 chr11:46959000-46969400 Weak transcription Colon Smooth Muscle Colon
11 chr11:46959000-46969400 Weak transcription Pancreas Pancrea
12 chr11:46959000-46969600 Weak transcription Rectal Smooth Muscle rectum
13 chr11:46959000-46969600 Weak transcription HSMMtube muscle
14 chr11:46959000-46973400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr11:46959000-46973600 Weak transcription HUVEC blood vessel
16 chr11:46959000-46973800 Weak transcription Primary T cells from cord blood blood
17 chr11:46959000-46973800 Weak transcription Primary hematopoietic stem cells blood
18 chr11:46959000-46973800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr11:46959000-46975600 Weak transcription Fetal Muscle Trunk muscle
20 chr11:46959000-46977000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr11:46959000-46980000 Weak transcription Aorta Aorta
22 chr11:46959000-46980000 Weak transcription Fetal Muscle Leg muscle
23 chr11:46959000-46980000 Weak transcription Ovary ovary
24 chr11:46959000-46980200 Weak transcription Primary B cells from cord blood blood
25 chr11:46959000-46980200 Weak transcription Gastric stomach
26 chr11:46959000-46980200 Weak transcription Lung lung
27 chr11:46959000-46980200 Weak transcription Thymus Thymus
28 chr11:46959000-46981000 Weak transcription Primary T cells fromperipheralblood blood
29 chr11:46959000-46982200 Weak transcription Fetal Kidney kidney
30 chr11:46959000-46982400 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr11:46959000-46982600 Weak transcription Fetal Thymus thymus
32 chr11:46959000-46998600 Weak transcription Left Ventricle heart
33 chr11:46959200-46965800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr11:46959200-46966000 Weak transcription HMEC breast
35 chr11:46959200-46966000 Weak transcription NHEK skin
36 chr11:46959200-46966200 Strong transcription Hela-S3 cervix
37 chr11:46959200-46968200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr11:46959200-46968400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr11:46959200-46968400 Weak transcription A549 lung
40 chr11:46959200-46968400 Weak transcription NH-A brain
41 chr11:46959200-46968600 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr11:46959200-46968600 Weak transcription HepG2 liver
43 chr11:46959200-46968600 Weak transcription NHDF-Ad bronchial
44 chr11:46959200-46968800 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr11:46959200-46968800 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr11:46959200-46968800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr11:46959200-46968800 Weak transcription Adipose Nuclei Adipose
48 chr11:46959200-46968800 Weak transcription Brain Hippocampus Middle brain
49 chr11:46959200-46969600 Weak transcription Muscle Satellite Cultured Cells --
50 chr11:46959200-46969600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015