The 2.0 version of rSNPBase

Variant report

Variant rs11039106
Chromosome Location chr11:47157865-47157866
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47124600-47159000 Weak transcription Primary T cells from cord blood blood
2 chr11:47129400-47158000 Weak transcription Aorta Aorta
3 chr11:47129400-47158600 Weak transcription Spleen Spleen
4 chr11:47130000-47159000 Weak transcription Hela-S3 cervix
5 chr11:47131600-47159400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr11:47131800-47161200 Weak transcription Brain Cingulate Gyrus brain
7 chr11:47140400-47159000 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr11:47141000-47159000 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr11:47141000-47159400 Weak transcription Brain Inferior Temporal Lobe brain
10 chr11:47141000-47164600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr11:47141200-47158400 Weak transcription Stomach Smooth Muscle stomach
12 chr11:47141200-47159400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr11:47143600-47164600 Weak transcription Placenta Amnion Placenta Amnion
14 chr11:47143600-47175200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr11:47144200-47159400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr11:47145200-47164800 Weak transcription Ovary ovary
17 chr11:47145200-47174800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr11:47146000-47159400 Weak transcription Colon Smooth Muscle Colon
19 chr11:47147000-47158600 Weak transcription Fetal Lung lung
20 chr11:47147000-47159200 Weak transcription Thymus Thymus
21 chr11:47147600-47164200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr11:47148200-47164400 Weak transcription NHEK skin
23 chr11:47149000-47170400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr11:47149400-47173200 Weak transcription Primary B cells from peripheral blood blood
25 chr11:47149600-47158600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr11:47149600-47170400 Weak transcription Esophagus oesophagus
27 chr11:47149800-47164200 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr11:47150000-47158600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr11:47150000-47159200 Weak transcription Fetal Brain Female brain
30 chr11:47151000-47159000 Weak transcription Brain Hippocampus Middle brain
31 chr11:47151200-47159200 Weak transcription Fetal Stomach stomach
32 chr11:47151200-47159200 Weak transcription HepG2 liver
33 chr11:47151200-47170600 Weak transcription Gastric stomach
34 chr11:47152400-47159200 Weak transcription Brain Anterior Caudate brain
35 chr11:47152400-47159200 Weak transcription Fetal Muscle Trunk muscle
36 chr11:47152400-47159200 Weak transcription NHDF-Ad bronchial
37 chr11:47152600-47161400 Weak transcription Brain Angular Gyrus brain
38 chr11:47152800-47164600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr11:47153000-47158600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr11:47153000-47159200 Weak transcription Fetal Muscle Leg muscle
41 chr11:47153000-47164400 Weak transcription H1 Cell Line embryonic stem cell
42 chr11:47153000-47164400 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr11:47153000-47164400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr11:47153000-47164400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr11:47153000-47174400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr11:47153200-47159200 Weak transcription Lung lung
47 chr11:47153400-47174800 Weak transcription Primary hematopoietic stem cells blood
48 chr11:47154800-47160800 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr11:47155000-47159000 Weak transcription Fetal Intestine Large intestine
50 chr11:47155400-47159000 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015