The 2.0 version of rSNPBase

Variant report

Variant rs11039134
Chromosome Location chr11:47242472-47242473
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47238400-47245000 Weak transcription Fetal Kidney kidney
2 chr11:47238400-47246200 Weak transcription Primary monocytes fromperipheralblood blood
3 chr11:47238400-47246600 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr11:47238400-47255800 Weak transcription Brain Anterior Caudate brain
5 chr11:47238400-47269400 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr11:47238600-47242800 Weak transcription Fetal Intestine Large intestine
7 chr11:47238600-47243800 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr11:47238600-47245600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr11:47238600-47247600 Weak transcription Colonic Mucosa Colon
10 chr11:47238600-47253800 Weak transcription Aorta Aorta
11 chr11:47238600-47254200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr11:47238600-47255400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr11:47238600-47255400 Weak transcription Right Ventricle heart
14 chr11:47238600-47255600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr11:47238600-47255800 Weak transcription Brain Substantia Nigra brain
16 chr11:47238600-47255800 Weak transcription Right Atrium heart
17 chr11:47238600-47256000 Weak transcription Brain Cingulate Gyrus brain
18 chr11:47238600-47259600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr11:47238600-47261000 Weak transcription Small Intestine intestine
20 chr11:47238800-47244000 Weak transcription Placenta Placenta
21 chr11:47238800-47254000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr11:47239000-47244800 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr11:47239400-47243200 Genic enhancers NHDF-Ad bronchial
24 chr11:47239400-47244400 Strong transcription Duodenum Mucosa Duodenum
25 chr11:47239400-47245000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr11:47239400-47246200 Strong transcription Primary T cells fromperipheralblood blood
27 chr11:47239400-47252200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr11:47239400-47252200 Strong transcription Fetal Thymus thymus
29 chr11:47239400-47255000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
30 chr11:47239600-47243600 Strong transcription Primary T cells from cord blood blood
31 chr11:47239600-47245600 Strong transcription Thymus Thymus
32 chr11:47239600-47251800 Strong transcription Fetal Stomach stomach
33 chr11:47239800-47243600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr11:47239800-47243600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr11:47239800-47245600 Strong transcription Primary T helper naive cells fromperipheralblood blood
36 chr11:47239800-47245600 Strong transcription Fetal Intestine Small intestine
37 chr11:47239800-47247400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr11:47239800-47254200 Weak transcription Lung lung
39 chr11:47239800-47255600 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr11:47239800-47255600 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr11:47240000-47245600 Strong transcription Primary T helper cells fromperipheralblood blood
42 chr11:47240000-47247200 Weak transcription Primary hematopoietic stem cells blood
43 chr11:47240000-47252400 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr11:47240000-47260200 Weak transcription Fetal Brain Female brain
45 chr11:47240200-47242800 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr11:47240200-47243600 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr11:47240200-47244000 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr11:47240200-47245600 Strong transcription HUES6 Cell Line embryonic stem cell
49 chr11:47240200-47254200 Weak transcription Esophagus oesophagus
50 chr11:47240200-47254200 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015