Variant report

Variant rs11039290
Chromosome Location chr11:47572279-47572280
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47546000-47572400 Weak transcription Fetal Intestine Large intestine
2 chr11:47546400-47573400 Weak transcription Colonic Mucosa Colon
3 chr11:47546400-47573600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:47553000-47573200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr11:47554400-47572400 Weak transcription Aorta Aorta
6 chr11:47554800-47572400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr11:47558400-47572600 Enhancers Primary T helper cells fromperipheralblood blood
8 chr11:47559600-47572600 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr11:47561600-47573200 Weak transcription Placenta Placenta
10 chr11:47562000-47572600 Weak transcription Brain Substantia Nigra brain
11 chr11:47562200-47572600 Weak transcription Placenta Amnion Placenta Amnion
12 chr11:47562200-47572800 Weak transcription Fetal Kidney kidney
13 chr11:47562600-47572400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr11:47562600-47572400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr11:47562600-47572400 Weak transcription Right Ventricle heart
16 chr11:47562600-47573200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr11:47562800-47572400 Weak transcription Stomach Mucosa stomach
18 chr11:47562800-47572400 Weak transcription NHDF-Ad bronchial
19 chr11:47564400-47572600 Weak transcription Fetal Muscle Leg muscle
20 chr11:47564800-47573200 Weak transcription Esophagus oesophagus
21 chr11:47565000-47572800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr11:47565000-47573200 Weak transcription Ovary ovary
23 chr11:47566200-47573800 Weak transcription Gastric stomach
24 chr11:47567200-47572600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr11:47567800-47572800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr11:47567800-47573000 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr11:47568000-47572400 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr11:47568200-47572600 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr11:47568200-47572600 Enhancers Adipose Nuclei Adipose
30 chr11:47568200-47572800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr11:47568200-47572800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr11:47568600-47572600 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr11:47569400-47572600 Enhancers Primary T regulatory cells fromperipheralblood blood
34 chr11:47569400-47572800 Enhancers Primary B cells from cord blood blood
35 chr11:47569600-47572400 Weak transcription Fetal Lung lung
36 chr11:47569800-47572400 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr11:47569800-47572400 Weak transcription Fetal Stomach stomach
38 chr11:47569800-47573200 Weak transcription Pancreas Pancrea
39 chr11:47570200-47572400 Enhancers Psoas Muscle Psoas
40 chr11:47570400-47572400 Enhancers Skeletal Muscle Female skeletal muscle
41 chr11:47570600-47572600 Enhancers Brain Hippocampus Middle brain
42 chr11:47570600-47573200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
43 chr11:47570600-47573400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr11:47570800-47572400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr11:47570800-47572600 Enhancers Cortex derived primary cultured neurospheres brain
46 chr11:47571000-47572600 Genic enhancers Primary hematopoietic stem cells short term culture blood
47 chr11:47571200-47572400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
48 chr11:47571200-47572400 Genic enhancers Fetal Thymus thymus
49 chr11:47571200-47572400 Enhancers Rectal Mucosa Donor 31 rectum
50 chr11:47571200-47572600 Enhancers Primary monocytes fromperipheralblood blood

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