The 2.0 version of rSNPBase

Variant report

Variant rs11039308
Chromosome Location chr11:47622412-47622413
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47607000-47632800 Weak transcription Dnd41 blood
2 chr11:47616000-47628200 Weak transcription Right Atrium heart
3 chr11:47616400-47627000 Weak transcription Pancreas Pancrea
4 chr11:47616400-47628200 Weak transcription HSMMtube muscle
5 chr11:47616400-47628400 Weak transcription Ovary ovary
6 chr11:47616600-47631400 Weak transcription Spleen Spleen
7 chr11:47616600-47632400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr11:47616600-47632600 Weak transcription Brain Substantia Nigra brain
9 chr11:47616800-47624000 Weak transcription Brain Cingulate Gyrus brain
10 chr11:47617400-47628200 Weak transcription Right Ventricle heart
11 chr11:47617600-47643200 Weak transcription Rectal Smooth Muscle rectum
12 chr11:47617800-47632400 Weak transcription Primary B cells from peripheral blood blood
13 chr11:47618000-47628200 Weak transcription Fetal Muscle Leg muscle
14 chr11:47618000-47639200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr11:47618400-47628200 Weak transcription Fetal Intestine Small intestine
16 chr11:47618400-47628600 Weak transcription Liver Liver
17 chr11:47619200-47627000 Weak transcription Primary T cells from cord blood blood
18 chr11:47619400-47631400 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr11:47619600-47631400 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr11:47619600-47631600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr11:47620600-47628200 Weak transcription Thymus Thymus
22 chr11:47620800-47637800 Weak transcription Placenta Amnion Placenta Amnion
23 chr11:47621000-47640400 Weak transcription Fetal Brain Female brain
24 chr11:47621200-47628800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr11:47621400-47628200 Weak transcription Stomach Smooth Muscle stomach
26 chr11:47621600-47628400 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr11:47621600-47628400 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr11:47621600-47632400 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr11:47621600-47638200 Weak transcription Hela-S3 cervix
30 chr11:47621600-47647600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr11:47621800-47627600 Weak transcription NHDF-Ad bronchial
32 chr11:47621800-47628200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr11:47621800-47628600 Weak transcription Brain Inferior Temporal Lobe brain
34 chr11:47621800-47629400 Weak transcription Brain Anterior Caudate brain
35 chr11:47621800-47631400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr11:47621800-47632200 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr11:47621800-47642000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr11:47622000-47623800 Weak transcription HepG2 liver
39 chr11:47622000-47624600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr11:47622000-47628200 Weak transcription Adipose Nuclei Adipose
41 chr11:47622000-47636000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr11:47622000-47637600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015