The 2.0 version of rSNPBase

Variant report

Variant rs11039309
Chromosome Location chr11:47630649-47630650
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47607000-47632800 Weak transcription Dnd41 blood
2 chr11:47616600-47631400 Weak transcription Spleen Spleen
3 chr11:47616600-47632400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr11:47616600-47632600 Weak transcription Brain Substantia Nigra brain
5 chr11:47617600-47643200 Weak transcription Rectal Smooth Muscle rectum
6 chr11:47617800-47632400 Weak transcription Primary B cells from peripheral blood blood
7 chr11:47618000-47639200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr11:47619400-47631400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr11:47619600-47631400 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr11:47619600-47631600 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr11:47620800-47637800 Weak transcription Placenta Amnion Placenta Amnion
12 chr11:47621000-47640400 Weak transcription Fetal Brain Female brain
13 chr11:47621600-47632400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr11:47621600-47638200 Weak transcription Hela-S3 cervix
15 chr11:47621600-47647600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr11:47621800-47631400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr11:47621800-47632200 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr11:47621800-47642000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr11:47622000-47636000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr11:47622000-47637600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr11:47623000-47632800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr11:47623800-47632400 Weak transcription Gastric stomach
23 chr11:47624200-47631400 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr11:47624200-47632600 Weak transcription Brain Cingulate Gyrus brain
25 chr11:47624400-47632400 Weak transcription Fetal Thymus thymus
26 chr11:47625200-47632600 Weak transcription Primary B cells from cord blood blood
27 chr11:47625200-47637800 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr11:47626000-47632800 Weak transcription Psoas Muscle Psoas
29 chr11:47626000-47638400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr11:47626200-47631400 Weak transcription Fetal Intestine Large intestine
31 chr11:47626200-47638400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr11:47626400-47631200 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr11:47626400-47631400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr11:47626400-47639200 Weak transcription Colonic Mucosa Colon
35 chr11:47626600-47635000 Weak transcription A549 lung
36 chr11:47626600-47639000 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr11:47627800-47631200 Weak transcription Primary monocytes fromperipheralblood blood
38 chr11:47627800-47643200 Weak transcription Pancreas Pancrea
39 chr11:47628600-47631400 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr11:47628600-47632400 Weak transcription Primary hematopoietic stem cells blood
41 chr11:47628600-47638400 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr11:47628600-47638600 Weak transcription H1 Cell Line embryonic stem cell
43 chr11:47628800-47642000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr11:47629000-47631200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr11:47629000-47632600 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr11:47629200-47631400 Weak transcription Primary T cells from cord blood blood
47 chr11:47629200-47632600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr11:47629200-47638000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr11:47629400-47631000 Weak transcription Lung lung
50 chr11:47629400-47631200 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015