Variant report

Variant	rs11057384
Chromosome Location	chr12:124370764-124370765
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11831541	0.96[EUR][1000 genomes]
rs6488908	0.96[EUR][1000 genomes]
rs7134843	0.94[EUR][1000 genomes]
rs7300414	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7301708	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7305239	0.96[EUR][1000 genomes]
rs7314612	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7315108	0.88[EUR][1000 genomes]
rs7315579	0.86[EUR][1000 genomes]
rs73219083	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs73424821	0.96[EUR][1000 genomes]
rs7967147	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498024	chr12:123994372-124459856	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:124368000-124370800	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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