Variant report

Variant	rs11068075
Chromosome Location	chr12:117000755-117000756
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10774871	0.90[ASN][1000 genomes]
rs10774872	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10850662	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10850663	0.90[ASN][1000 genomes]
rs11068062	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11068070	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11609040	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11609872	0.84[ASN][1000 genomes]
rs11610226	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11615960	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1394801	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1394802	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2047952	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2089222	0.96[ASN][1000 genomes]
rs2102294	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2893685	0.80[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs60521218	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6490075	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6490076	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7297552	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7300418	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7304300	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7315385	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7954181	0.83[ASN][1000 genomes]
rs7961538	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7969190	0.84[ASN][1000 genomes]
rs7969566	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7972701	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7976256	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040904	chr12:116999897-117033944	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:116997400-117001800	Weak transcription	Fetal Lung	lung
2	chr12:116998000-117001800	Weak transcription	NHEK	skin
3	chr12:117000200-117002400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr12:117000400-117001200	Weak transcription	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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