Variant report

Variant	rs11068617
Chromosome Location	chr12:118115422-118115423
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1002231	0.92[EUR][1000 genomes]
rs10850884	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11068616	0.88[EUR][1000 genomes]
rs11068623	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs11068624	1.00[CEU][hapmap];0.88[GIH][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes]
rs11068625	0.96[EUR][1000 genomes]
rs12308097	0.87[EUR][1000 genomes]
rs12309599	0.87[EUR][1000 genomes]
rs12312625	0.81[YRI][hapmap]
rs1446425	0.88[GIH][hapmap]
rs488999	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs492479	0.95[CEU][hapmap];0.91[CHD][hapmap];0.83[GIH][hapmap];0.85[MEX][hapmap];0.86[TSI][hapmap];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs597780	0.91[EUR][1000 genomes]
rs598670	0.90[EUR][1000 genomes]
rs657724	0.95[CEU][hapmap];0.91[CHD][hapmap];0.81[GIH][hapmap];0.90[MEX][hapmap];0.86[TSI][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7294385	0.81[GIH][hapmap]
rs73211999	0.97[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118105400-118118800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr12:118110200-118122600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr12:118112200-118117400	Weak transcription	NHDF-Ad	bronchial
4	chr12:118112600-118117400	Weak transcription	NH-A	brain
5	chr12:118114000-118117200	Weak transcription	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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