Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:53168390..53171371-chr15:53174252..53176521,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11070935	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12101773	0.86[CHB][hapmap]
rs12899370	0.92[CEU][hapmap]
rs12900070	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12912619	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12913472	0.88[EUR][1000 genomes]
rs16965329	0.86[CHB][hapmap]
rs16965332	0.86[CHB][hapmap]
rs1899734	0.96[CEU][hapmap];0.91[GIH][hapmap];0.86[TSI][hapmap];0.92[EUR][1000 genomes]
rs1899739	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2120447	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2165989	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2414185	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2414187	0.95[ASN][1000 genomes]
rs2440331	0.97[ASN][1000 genomes]
rs2456520	0.92[CHB][hapmap];0.83[CHD][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs61588331	0.81[ASN][1000 genomes]
rs6493597	0.88[EUR][1000 genomes]
rs6493598	0.88[EUR][1000 genomes]
rs73413458	0.96[ASN][1000 genomes]
rs8024111	0.86[CHB][hapmap]
rs8030817	0.89[EUR][1000 genomes]
rs8032241	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8032248	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471245	chr15:52607262-53187165	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
2	nsv1043999	chr15:53162917-53187508	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:53165800-53183200	Weak transcription	Pancreas	Pancrea

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